Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ERBB2P04626 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ERBB2P04626 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
ERBB2P04626 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ERBB2P04626 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ERBB2P04626 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ERBB2P04626 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ERBB2P04626 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ERBB2P04626 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
ERBB2P04626 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.35■■□□□ 1.65
ERBB2P04626 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
ERBB2P04626 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ERBB2P04626 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ERBB2P04626 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.34■■□□□ 1.65
ERBB2P04626 U85056.1-201ENST00000616429 682 ntBASIC25.34■■□□□ 1.65
ERBB2P04626 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ERBB2P04626 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
ERBB2P04626 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ERBB2P04626 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ERBB2P04626 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.33■■□□□ 1.65
ERBB2P04626 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.33■■□□□ 1.65
ERBB2P04626 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ERBB2P04626 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.32■■□□□ 1.64
ERBB2P04626 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
ERBB2P04626 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ERBB2P04626 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ERBB2P04626 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ERBB2P04626 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ERBB2P04626 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
ERBB2P04626 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ERBB2P04626 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ERBB2P04626 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.31■■□□□ 1.64
ERBB2P04626 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ERBB2P04626 AL592293.1-201ENST00000502889 1188 ntBASIC25.31■■□□□ 1.64
ERBB2P04626 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ERBB2P04626 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ERBB2P04626 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ERBB2P04626 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ERBB2P04626 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.3■■□□□ 1.64
ERBB2P04626 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ERBB2P04626 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ERBB2P04626 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.3■■□□□ 1.64
ERBB2P04626 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.29■■□□□ 1.64
ERBB2P04626 ABHD17AP5-201ENST00000580133 923 ntBASIC25.29■■□□□ 1.64
ERBB2P04626 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
ERBB2P04626 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ERBB2P04626 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
ERBB2P04626 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ERBB2P04626 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.28■■□□□ 1.64
ERBB2P04626 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ERBB2P04626 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ERBB2P04626 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.27■■□□□ 1.64
ERBB2P04626 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ERBB2P04626 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ERBB2P04626 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.27■■□□□ 1.64
ERBB2P04626 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ERBB2P04626 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ERBB2P04626 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ERBB2P04626 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.26■■□□□ 1.63
ERBB2P04626 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ERBB2P04626 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.26■■□□□ 1.63
ERBB2P04626 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ERBB2P04626 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ERBB2P04626 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ERBB2P04626 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ERBB2P04626 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ERBB2P04626 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ERBB2P04626 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
ERBB2P04626 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ERBB2P04626 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
ERBB2P04626 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
ERBB2P04626 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ERBB2P04626 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.24■■□□□ 1.63
ERBB2P04626 SPCS2P3-201ENST00000500401 656 ntBASIC25.24■■□□□ 1.63
ERBB2P04626 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.24■■□□□ 1.63
ERBB2P04626 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ERBB2P04626 AC020928.2-201ENST00000588717 2197 ntBASIC25.23■■□□□ 1.63
ERBB2P04626 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.23■■□□□ 1.63
ERBB2P04626 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.23■■□□□ 1.63
ERBB2P04626 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.23■■□□□ 1.63
ERBB2P04626 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ERBB2P04626 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ERBB2P04626 KRT18P60-201ENST00000312876 1297 ntBASIC25.22■■□□□ 1.63
ERBB2P04626 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.22■■□□□ 1.63
ERBB2P04626 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
ERBB2P04626 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
ERBB2P04626 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ERBB2P04626 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.22■■□□□ 1.63
ERBB2P04626 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ERBB2P04626 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.22■■□□□ 1.63
ERBB2P04626 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
ERBB2P04626 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.21■■□□□ 1.63
ERBB2P04626 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
ERBB2P04626 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
ERBB2P04626 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
ERBB2P04626 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
ERBB2P04626 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
ERBB2P04626 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.2■■□□□ 1.62
ERBB2P04626 NTF6A-201ENST00000591175 560 ntBASIC25.2■■□□□ 1.62
ERBB2P04626 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms