Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC007029.1-201ENST00000604183 313 ntBASIC27.1■■□□□ 1.93
BLOC1S4Q9NUP1 RNF126P1-201ENST00000567452 1320 ntBASIC27.1■■□□□ 1.93
BLOC1S4Q9NUP1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
BLOC1S4Q9NUP1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
BLOC1S4Q9NUP1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.09■■□□□ 1.93
BLOC1S4Q9NUP1 AC010501.1-201ENST00000606270 1962 ntBASIC27.09■■□□□ 1.93
BLOC1S4Q9NUP1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.09■■□□□ 1.93
BLOC1S4Q9NUP1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
BLOC1S4Q9NUP1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
BLOC1S4Q9NUP1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
BLOC1S4Q9NUP1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
BLOC1S4Q9NUP1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
BLOC1S4Q9NUP1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
BLOC1S4Q9NUP1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.08■■□□□ 1.93
BLOC1S4Q9NUP1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
BLOC1S4Q9NUP1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
BLOC1S4Q9NUP1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
BLOC1S4Q9NUP1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
BLOC1S4Q9NUP1 RP9P-202ENST00000450133 1212 ntBASIC27.07■■□□□ 1.92
BLOC1S4Q9NUP1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
BLOC1S4Q9NUP1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
BLOC1S4Q9NUP1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.06■■□□□ 1.92
BLOC1S4Q9NUP1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
BLOC1S4Q9NUP1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
BLOC1S4Q9NUP1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
BLOC1S4Q9NUP1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.05■■□□□ 1.92
BLOC1S4Q9NUP1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
BLOC1S4Q9NUP1 AC093536.1-201ENST00000569153 554 ntBASIC27.05■■□□□ 1.92
BLOC1S4Q9NUP1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
BLOC1S4Q9NUP1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.05■■□□□ 1.92
BLOC1S4Q9NUP1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
BLOC1S4Q9NUP1 AC096887.2-201ENST00000623443 1957 ntBASIC27.04■■□□□ 1.92
BLOC1S4Q9NUP1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
BLOC1S4Q9NUP1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
BLOC1S4Q9NUP1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
BLOC1S4Q9NUP1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.04■■□□□ 1.92
BLOC1S4Q9NUP1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
BLOC1S4Q9NUP1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
BLOC1S4Q9NUP1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.04■■□□□ 1.92
BLOC1S4Q9NUP1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
BLOC1S4Q9NUP1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
BLOC1S4Q9NUP1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.02■■□□□ 1.92
BLOC1S4Q9NUP1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
BLOC1S4Q9NUP1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
BLOC1S4Q9NUP1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.01■■□□□ 1.92
BLOC1S4Q9NUP1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
BLOC1S4Q9NUP1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
BLOC1S4Q9NUP1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
BLOC1S4Q9NUP1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
BLOC1S4Q9NUP1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27■■□□□ 1.91
BLOC1S4Q9NUP1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
BLOC1S4Q9NUP1 GFER-205ENST00000569451 517 ntTSL 5 BASIC27■■□□□ 1.91
BLOC1S4Q9NUP1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27■■□□□ 1.91
BLOC1S4Q9NUP1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
BLOC1S4Q9NUP1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
BLOC1S4Q9NUP1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
BLOC1S4Q9NUP1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
BLOC1S4Q9NUP1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
BLOC1S4Q9NUP1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.99■■□□□ 1.91
BLOC1S4Q9NUP1 RAP2CP1-202ENST00000605179 643 ntBASIC26.99■■□□□ 1.91
BLOC1S4Q9NUP1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
BLOC1S4Q9NUP1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
BLOC1S4Q9NUP1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
BLOC1S4Q9NUP1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.98■■□□□ 1.91
BLOC1S4Q9NUP1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
BLOC1S4Q9NUP1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
BLOC1S4Q9NUP1 RARRES2P2-201ENST00000394842 485 ntBASIC26.98■■□□□ 1.91
BLOC1S4Q9NUP1 AC026202.3-201ENST00000600805 1127 ntBASIC26.98■■□□□ 1.91
BLOC1S4Q9NUP1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
BLOC1S4Q9NUP1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.97■■□□□ 1.91
BLOC1S4Q9NUP1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
BLOC1S4Q9NUP1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.97■■□□□ 1.91
BLOC1S4Q9NUP1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
BLOC1S4Q9NUP1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
BLOC1S4Q9NUP1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
BLOC1S4Q9NUP1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
BLOC1S4Q9NUP1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
BLOC1S4Q9NUP1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
BLOC1S4Q9NUP1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.93■■□□□ 1.9
BLOC1S4Q9NUP1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
BLOC1S4Q9NUP1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
BLOC1S4Q9NUP1 AC009831.1-201ENST00000580420 1582 ntBASIC26.93■■□□□ 1.9
BLOC1S4Q9NUP1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
BLOC1S4Q9NUP1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
BLOC1S4Q9NUP1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
BLOC1S4Q9NUP1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
BLOC1S4Q9NUP1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
BLOC1S4Q9NUP1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
BLOC1S4Q9NUP1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
BLOC1S4Q9NUP1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
BLOC1S4Q9NUP1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
BLOC1S4Q9NUP1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
BLOC1S4Q9NUP1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.91■■□□□ 1.9
BLOC1S4Q9NUP1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.91■■□□□ 1.9
BLOC1S4Q9NUP1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BLOC1S4Q9NUP1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.9■■□□□ 1.9
BLOC1S4Q9NUP1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
BLOC1S4Q9NUP1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.9■■□□□ 1.9
BLOC1S4Q9NUP1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
BLOC1S4Q9NUP1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms