Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.32■■□□□ 1.32
CPNE5Q9HCH3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CPNE5Q9HCH3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.31■■□□□ 1.32
CPNE5Q9HCH3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CPNE5Q9HCH3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CPNE5Q9HCH3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CPNE5Q9HCH3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CPNE5Q9HCH3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.31■■□□□ 1.32
CPNE5Q9HCH3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.31■■□□□ 1.32
CPNE5Q9HCH3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.31■■□□□ 1.32
CPNE5Q9HCH3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.31■■□□□ 1.32
CPNE5Q9HCH3 AC100797.4-201ENST00000631653 1827 ntBASIC23.31■■□□□ 1.32
CPNE5Q9HCH3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.3■■□□□ 1.32
CPNE5Q9HCH3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPNE5Q9HCH3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CPNE5Q9HCH3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPNE5Q9HCH3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CPNE5Q9HCH3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CPNE5Q9HCH3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.3■■□□□ 1.32
CPNE5Q9HCH3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.3■■□□□ 1.32
CPNE5Q9HCH3 AL031848.2-201ENST00000607670 837 ntBASIC23.3■■□□□ 1.32
CPNE5Q9HCH3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CPNE5Q9HCH3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.29■■□□□ 1.32
CPNE5Q9HCH3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE5Q9HCH3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.29■■□□□ 1.32
CPNE5Q9HCH3 AC103724.3-201ENST00000564481 992 ntBASIC23.29■■□□□ 1.32
CPNE5Q9HCH3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.29■■□□□ 1.32
CPNE5Q9HCH3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE5Q9HCH3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.28■■□□□ 1.32
CPNE5Q9HCH3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE5Q9HCH3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.28■■□□□ 1.32
CPNE5Q9HCH3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE5Q9HCH3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE5Q9HCH3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CPNE5Q9HCH3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.27■■□□□ 1.32
CPNE5Q9HCH3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPNE5Q9HCH3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPNE5Q9HCH3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CPNE5Q9HCH3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPNE5Q9HCH3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CPNE5Q9HCH3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.26■■□□□ 1.31
CPNE5Q9HCH3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPNE5Q9HCH3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPNE5Q9HCH3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPNE5Q9HCH3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPNE5Q9HCH3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.25■■□□□ 1.31
CPNE5Q9HCH3 MIR3960-201ENST00000583311 91 ntBASIC23.25■■□□□ 1.31
CPNE5Q9HCH3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPNE5Q9HCH3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPNE5Q9HCH3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.24■■□□□ 1.31
CPNE5Q9HCH3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPNE5Q9HCH3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPNE5Q9HCH3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CPNE5Q9HCH3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPNE5Q9HCH3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.23■■□□□ 1.31
CPNE5Q9HCH3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPNE5Q9HCH3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.23■■□□□ 1.31
CPNE5Q9HCH3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPNE5Q9HCH3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPNE5Q9HCH3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPNE5Q9HCH3 AC008406.3-201ENST00000620001 1374 ntBASIC23.23■■□□□ 1.31
CPNE5Q9HCH3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CPNE5Q9HCH3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CPNE5Q9HCH3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.23■■□□□ 1.31
CPNE5Q9HCH3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE5Q9HCH3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.22■■□□□ 1.31
CPNE5Q9HCH3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.22■■□□□ 1.31
CPNE5Q9HCH3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE5Q9HCH3 AC239859.2-201ENST00000444165 318 ntBASIC23.22■■□□□ 1.31
CPNE5Q9HCH3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.22■■□□□ 1.31
CPNE5Q9HCH3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE5Q9HCH3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE5Q9HCH3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE5Q9HCH3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CPNE5Q9HCH3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CPNE5Q9HCH3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.21■■□□□ 1.31
CPNE5Q9HCH3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.21■■□□□ 1.31
CPNE5Q9HCH3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPNE5Q9HCH3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
CPNE5Q9HCH3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.2■■□□□ 1.3
CPNE5Q9HCH3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.2■■□□□ 1.3
CPNE5Q9HCH3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.2■■□□□ 1.3
CPNE5Q9HCH3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE5Q9HCH3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
CPNE5Q9HCH3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE5Q9HCH3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CPNE5Q9HCH3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.19■■□□□ 1.3
CPNE5Q9HCH3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE5Q9HCH3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.18■■□□□ 1.3
CPNE5Q9HCH3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.18■■□□□ 1.3
CPNE5Q9HCH3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE5Q9HCH3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE5Q9HCH3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE5Q9HCH3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE5Q9HCH3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE5Q9HCH3 AP002414.2-202ENST00000590929 1450 ntBASIC23.17■■□□□ 1.3
CPNE5Q9HCH3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CPNE5Q9HCH3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE5Q9HCH3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE5Q9HCH3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms