Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.39■■■□□ 2.78
CPNE5Q9HCH3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
CPNE5Q9HCH3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.02■■■□□ 2.72
CPNE5Q9HCH3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CPNE5Q9HCH3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CPNE5Q9HCH3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CPNE5Q9HCH3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
CPNE5Q9HCH3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
CPNE5Q9HCH3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.96■■■□□ 2.55
CPNE5Q9HCH3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
CPNE5Q9HCH3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CPNE5Q9HCH3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.66■■■□□ 2.5
CPNE5Q9HCH3 AL356512.1-201ENST00000607453 1739 ntBASIC30.65■■■□□ 2.5
CPNE5Q9HCH3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.6■■■□□ 2.49
CPNE5Q9HCH3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CPNE5Q9HCH3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
CPNE5Q9HCH3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CPNE5Q9HCH3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
CPNE5Q9HCH3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
CPNE5Q9HCH3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
CPNE5Q9HCH3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CPNE5Q9HCH3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CPNE5Q9HCH3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
CPNE5Q9HCH3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.05■■■□□ 2.4
CPNE5Q9HCH3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CPNE5Q9HCH3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
CPNE5Q9HCH3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.93■■■□□ 2.38
CPNE5Q9HCH3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CPNE5Q9HCH3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.84■■■□□ 2.37
CPNE5Q9HCH3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
CPNE5Q9HCH3 ZNRF2P1-201ENST00000441407 443 ntBASIC29.67■■■□□ 2.34
CPNE5Q9HCH3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.33
CPNE5Q9HCH3 AC006077.2-201ENST00000623591 457 ntBASIC29.62■■■□□ 2.33
CPNE5Q9HCH3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.62■■■□□ 2.33
CPNE5Q9HCH3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.57■■■□□ 2.32
CPNE5Q9HCH3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CPNE5Q9HCH3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
CPNE5Q9HCH3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CPNE5Q9HCH3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.4■■■□□ 2.3
CPNE5Q9HCH3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.39■■■□□ 2.3
CPNE5Q9HCH3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.38■■■□□ 2.29
CPNE5Q9HCH3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CPNE5Q9HCH3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CPNE5Q9HCH3 AC015813.7-201ENST00000623294 581 ntBASIC29.28■■■□□ 2.28
CPNE5Q9HCH3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CPNE5Q9HCH3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CPNE5Q9HCH3 AP002365.1-201ENST00000603448 772 ntBASIC28.95■■■□□ 2.22
CPNE5Q9HCH3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.93■■■□□ 2.22
CPNE5Q9HCH3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CPNE5Q9HCH3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
CPNE5Q9HCH3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CPNE5Q9HCH3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.81■■■□□ 2.2
CPNE5Q9HCH3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.78■■■□□ 2.2
CPNE5Q9HCH3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CPNE5Q9HCH3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CPNE5Q9HCH3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.71■■■□□ 2.19
CPNE5Q9HCH3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.71■■■□□ 2.19
CPNE5Q9HCH3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
CPNE5Q9HCH3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
CPNE5Q9HCH3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.6■■■□□ 2.17
CPNE5Q9HCH3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.6■■■□□ 2.17
CPNE5Q9HCH3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
CPNE5Q9HCH3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.57■■■□□ 2.16
CPNE5Q9HCH3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CPNE5Q9HCH3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.53■■■□□ 2.16
CPNE5Q9HCH3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CPNE5Q9HCH3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CPNE5Q9HCH3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CPNE5Q9HCH3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.48■■■□□ 2.15
CPNE5Q9HCH3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CPNE5Q9HCH3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CPNE5Q9HCH3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CPNE5Q9HCH3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.41■■■□□ 2.14
CPNE5Q9HCH3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
CPNE5Q9HCH3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
CPNE5Q9HCH3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CPNE5Q9HCH3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.34■■■□□ 2.13
CPNE5Q9HCH3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
CPNE5Q9HCH3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
CPNE5Q9HCH3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.24■■■□□ 2.11
CPNE5Q9HCH3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.24■■■□□ 2.11
CPNE5Q9HCH3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CPNE5Q9HCH3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CPNE5Q9HCH3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CPNE5Q9HCH3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.16■■■□□ 2.1
CPNE5Q9HCH3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.15■■■□□ 2.1
CPNE5Q9HCH3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CPNE5Q9HCH3 DYNLL1-208ENST00000550178 581 ntBASIC28.12■■■□□ 2.09
CPNE5Q9HCH3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
CPNE5Q9HCH3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CPNE5Q9HCH3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
CPNE5Q9HCH3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CPNE5Q9HCH3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.04■■■□□ 2.08
CPNE5Q9HCH3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CPNE5Q9HCH3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
CPNE5Q9HCH3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.01■■■□□ 2.07
CPNE5Q9HCH3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CPNE5Q9HCH3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CPNE5Q9HCH3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
CPNE5Q9HCH3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms