Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 AC142381.3-201ENST00000568208 1670 ntBASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CYSTM1Q9H1C7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC14.35□□□□□ -0.11
CYSTM1Q9H1C7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 AL137060.1-201ENST00000618151 2648 ntBASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CYSTM1Q9H1C7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.33□□□□□ -0.11
CYSTM1Q9H1C7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CYSTM1Q9H1C7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CYSTM1Q9H1C7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CYSTM1Q9H1C7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CYSTM1Q9H1C7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CYSTM1Q9H1C7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CYSTM1Q9H1C7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC14.33□□□□□ -0.12
CYSTM1Q9H1C7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CYSTM1Q9H1C7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CYSTM1Q9H1C7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYSTM1Q9H1C7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYSTM1Q9H1C7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CYSTM1Q9H1C7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC14.32□□□□□ -0.12
CYSTM1Q9H1C7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYSTM1Q9H1C7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYSTM1Q9H1C7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYSTM1Q9H1C7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYSTM1Q9H1C7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CYSTM1Q9H1C7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.31□□□□□ -0.12
CYSTM1Q9H1C7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CYSTM1Q9H1C7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CYSTM1Q9H1C7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC14.31□□□□□ -0.12
CYSTM1Q9H1C7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CYSTM1Q9H1C7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CYSTM1Q9H1C7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CYSTM1Q9H1C7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.3□□□□□ -0.12
CYSTM1Q9H1C7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CYSTM1Q9H1C7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CYSTM1Q9H1C7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CYSTM1Q9H1C7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CYSTM1Q9H1C7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CYSTM1Q9H1C7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC14.3□□□□□ -0.12
CYSTM1Q9H1C7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 AC138932.3-201ENST00000567634 1902 ntBASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CYSTM1Q9H1C7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.28□□□□□ -0.12
CYSTM1Q9H1C7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.28□□□□□ -0.12
CYSTM1Q9H1C7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CYSTM1Q9H1C7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CYSTM1Q9H1C7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CYSTM1Q9H1C7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CYSTM1Q9H1C7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CYSTM1Q9H1C7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CYSTM1Q9H1C7 AC097639.1-201ENST00000565519 1891 ntBASIC14.28□□□□□ -0.12
CYSTM1Q9H1C7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC14.28□□□□□ -0.12
CYSTM1Q9H1C7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms