Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH15Q96QU1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDH15Q96QU1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDH15Q96QU1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH15Q96QU1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
PCDH15Q96QU1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24■■□□□ 1.43
PCDH15Q96QU1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24■■□□□ 1.43
PCDH15Q96QU1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH15Q96QU1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDH15Q96QU1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.99■■□□□ 1.43
PCDH15Q96QU1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
PCDH15Q96QU1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDH15Q96QU1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH15Q96QU1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDH15Q96QU1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PCDH15Q96QU1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDH15Q96QU1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH15Q96QU1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDH15Q96QU1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDH15Q96QU1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
PCDH15Q96QU1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
PCDH15Q96QU1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDH15Q96QU1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.97■■□□□ 1.43
PCDH15Q96QU1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDH15Q96QU1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDH15Q96QU1 DRD5P2-201ENST00000421395 2012 ntBASIC23.97■■□□□ 1.43
PCDH15Q96QU1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDH15Q96QU1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH15Q96QU1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
PCDH15Q96QU1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
PCDH15Q96QU1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH15Q96QU1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH15Q96QU1 UNC93B8-201ENST00000511903 705 ntBASIC23.96■■□□□ 1.43
PCDH15Q96QU1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH15Q96QU1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH15Q96QU1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDH15Q96QU1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH15Q96QU1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH15Q96QU1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH15Q96QU1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH15Q96QU1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH15Q96QU1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH15Q96QU1 LONRF2P2-201ENST00000439212 571 ntBASIC23.94■■□□□ 1.42
PCDH15Q96QU1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
PCDH15Q96QU1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDH15Q96QU1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDH15Q96QU1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH15Q96QU1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH15Q96QU1 BX664725.1-201ENST00000438252 379 ntBASIC23.94■■□□□ 1.42
PCDH15Q96QU1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH15Q96QU1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH15Q96QU1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH15Q96QU1 AC008406.3-201ENST00000620001 1374 ntBASIC23.93■■□□□ 1.42
PCDH15Q96QU1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PCDH15Q96QU1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.93■■□□□ 1.42
PCDH15Q96QU1 MIR4787-201ENST00000607364 84 ntBASIC23.93■■□□□ 1.42
PCDH15Q96QU1 MIR935-201ENST00000401179 91 ntBASIC23.92■■□□□ 1.42
PCDH15Q96QU1 KRT16P3-201ENST00000439127 1283 ntBASIC23.92■■□□□ 1.42
PCDH15Q96QU1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH15Q96QU1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH15Q96QU1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH15Q96QU1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDH15Q96QU1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH15Q96QU1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
PCDH15Q96QU1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH15Q96QU1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDH15Q96QU1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDH15Q96QU1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH15Q96QU1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH15Q96QU1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH15Q96QU1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
PCDH15Q96QU1 AC022616.5-201ENST00000518796 181 ntBASIC23.91■■□□□ 1.42
PCDH15Q96QU1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH15Q96QU1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PCDH15Q96QU1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDH15Q96QU1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDH15Q96QU1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDH15Q96QU1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDH15Q96QU1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.9■■□□□ 1.42
PCDH15Q96QU1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
PCDH15Q96QU1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH15Q96QU1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH15Q96QU1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.89■■□□□ 1.42
PCDH15Q96QU1 KRT125P-201ENST00000546827 989 ntBASIC23.89■■□□□ 1.42
PCDH15Q96QU1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH15Q96QU1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH15Q96QU1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDH15Q96QU1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH15Q96QU1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
PCDH15Q96QU1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDH15Q96QU1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDH15Q96QU1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PCDH15Q96QU1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH15Q96QU1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH15Q96QU1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH15Q96QU1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDH15Q96QU1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDH15Q96QU1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH15Q96QU1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH15Q96QU1 MIR638-201ENST00000385237 100 ntBASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms