Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
RETREG2Q8NC44 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
RETREG2Q8NC44 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RETREG2Q8NC44 SPCS2P3-201ENST00000500401 656 ntBASIC27.42■■□□□ 1.98
RETREG2Q8NC44 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.42■■□□□ 1.98
RETREG2Q8NC44 MIR6765-201ENST00000614092 87 ntBASIC27.42■■□□□ 1.98
RETREG2Q8NC44 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
RETREG2Q8NC44 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RETREG2Q8NC44 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RETREG2Q8NC44 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RETREG2Q8NC44 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RETREG2Q8NC44 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.41■■□□□ 1.98
RETREG2Q8NC44 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.41■■□□□ 1.98
RETREG2Q8NC44 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RETREG2Q8NC44 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RETREG2Q8NC44 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.41■■□□□ 1.98
RETREG2Q8NC44 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RETREG2Q8NC44 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RETREG2Q8NC44 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RETREG2Q8NC44 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RETREG2Q8NC44 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
RETREG2Q8NC44 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
RETREG2Q8NC44 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RETREG2Q8NC44 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RETREG2Q8NC44 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
RETREG2Q8NC44 YBX1P4-201ENST00000392794 808 ntBASIC27.39■■□□□ 1.98
RETREG2Q8NC44 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RETREG2Q8NC44 AC018755.3-202ENST00000596210 929 ntBASIC27.39■■□□□ 1.98
RETREG2Q8NC44 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
RETREG2Q8NC44 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.39■■□□□ 1.97
RETREG2Q8NC44 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
RETREG2Q8NC44 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC27.38■■□□□ 1.97
RETREG2Q8NC44 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RETREG2Q8NC44 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.38■■□□□ 1.97
RETREG2Q8NC44 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.37■■□□□ 1.97
RETREG2Q8NC44 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RETREG2Q8NC44 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RETREG2Q8NC44 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RETREG2Q8NC44 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RETREG2Q8NC44 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.36■■□□□ 1.97
RETREG2Q8NC44 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
RETREG2Q8NC44 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
RETREG2Q8NC44 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RETREG2Q8NC44 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.35■■□□□ 1.97
RETREG2Q8NC44 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.35■■□□□ 1.97
RETREG2Q8NC44 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.35■■□□□ 1.97
RETREG2Q8NC44 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RETREG2Q8NC44 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RETREG2Q8NC44 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
RETREG2Q8NC44 AL359504.2-201ENST00000605506 1601 ntBASIC27.34■■□□□ 1.97
RETREG2Q8NC44 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RETREG2Q8NC44 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RETREG2Q8NC44 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.34■■□□□ 1.97
RETREG2Q8NC44 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
RETREG2Q8NC44 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RETREG2Q8NC44 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.34■■□□□ 1.97
RETREG2Q8NC44 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RETREG2Q8NC44 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RETREG2Q8NC44 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RETREG2Q8NC44 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
RETREG2Q8NC44 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RETREG2Q8NC44 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.33■■□□□ 1.97
RETREG2Q8NC44 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.33■■□□□ 1.97
RETREG2Q8NC44 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.33■■□□□ 1.97
RETREG2Q8NC44 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.33■■□□□ 1.97
RETREG2Q8NC44 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RETREG2Q8NC44 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.33■■□□□ 1.97
RETREG2Q8NC44 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
RETREG2Q8NC44 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RETREG2Q8NC44 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.32■■□□□ 1.96
RETREG2Q8NC44 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RETREG2Q8NC44 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.32■■□□□ 1.96
RETREG2Q8NC44 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RETREG2Q8NC44 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
RETREG2Q8NC44 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
RETREG2Q8NC44 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
RETREG2Q8NC44 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RETREG2Q8NC44 AC009299.2-201ENST00000482477 511 ntBASIC27.31■■□□□ 1.96
RETREG2Q8NC44 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RETREG2Q8NC44 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.31■■□□□ 1.96
RETREG2Q8NC44 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.3■■□□□ 1.96
RETREG2Q8NC44 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RETREG2Q8NC44 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RETREG2Q8NC44 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RETREG2Q8NC44 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RETREG2Q8NC44 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RETREG2Q8NC44 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RETREG2Q8NC44 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RETREG2Q8NC44 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
RETREG2Q8NC44 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.28■■□□□ 1.96
RETREG2Q8NC44 AC103834.1-201ENST00000520383 144 ntBASIC27.28■■□□□ 1.96
RETREG2Q8NC44 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RETREG2Q8NC44 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.27■■□□□ 1.96
RETREG2Q8NC44 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RETREG2Q8NC44 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
RETREG2Q8NC44 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RETREG2Q8NC44 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
RETREG2Q8NC44 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
RETREG2Q8NC44 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RETREG2Q8NC44 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms