Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRTM1Q86UE6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM1Q86UE6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM1Q86UE6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM1Q86UE6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM1Q86UE6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM1Q86UE6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM1Q86UE6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM1Q86UE6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM1Q86UE6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
LRRTM1Q86UE6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRTM1Q86UE6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
LRRTM1Q86UE6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LRRTM1Q86UE6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRTM1Q86UE6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LRRTM1Q86UE6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRTM1Q86UE6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.9■□□□□ 0.94
LRRTM1Q86UE6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.9■□□□□ 0.94
LRRTM1Q86UE6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRRTM1Q86UE6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.9■□□□□ 0.94
LRRTM1Q86UE6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
LRRTM1Q86UE6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRRTM1Q86UE6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRTM1Q86UE6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
LRRTM1Q86UE6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.89■□□□□ 0.94
LRRTM1Q86UE6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRTM1Q86UE6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRTM1Q86UE6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRTM1Q86UE6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRRTM1Q86UE6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.89■□□□□ 0.93
LRRTM1Q86UE6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LRRTM1Q86UE6 DUX4L29-201ENST00000425409 679 ntBASIC20.88■□□□□ 0.93
LRRTM1Q86UE6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.88■□□□□ 0.93
LRRTM1Q86UE6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM1Q86UE6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
LRRTM1Q86UE6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM1Q86UE6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM1Q86UE6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM1Q86UE6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM1Q86UE6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM1Q86UE6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM1Q86UE6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LRRTM1Q86UE6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM1Q86UE6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM1Q86UE6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM1Q86UE6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM1Q86UE6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM1Q86UE6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRTM1Q86UE6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM1Q86UE6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM1Q86UE6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.86■□□□□ 0.93
LRRTM1Q86UE6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM1Q86UE6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.85■□□□□ 0.93
LRRTM1Q86UE6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM1Q86UE6 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.85■□□□□ 0.93
LRRTM1Q86UE6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM1Q86UE6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM1Q86UE6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRTM1Q86UE6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRTM1Q86UE6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM1Q86UE6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM1Q86UE6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM1Q86UE6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM1Q86UE6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRTM1Q86UE6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRTM1Q86UE6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRRTM1Q86UE6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRTM1Q86UE6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.83■□□□□ 0.93
LRRTM1Q86UE6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRTM1Q86UE6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRTM1Q86UE6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
LRRTM1Q86UE6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRTM1Q86UE6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRTM1Q86UE6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LRRTM1Q86UE6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
LRRTM1Q86UE6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRTM1Q86UE6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LRRTM1Q86UE6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.82■□□□□ 0.92
LRRTM1Q86UE6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM1Q86UE6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LRRTM1Q86UE6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LRRTM1Q86UE6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LRRTM1Q86UE6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM1Q86UE6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM1Q86UE6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms