Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX53Q86TM3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
DDX53Q86TM3 AC131212.1-201ENST00000613771 668 ntBASIC25.95■■□□□ 1.74
DDX53Q86TM3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX53Q86TM3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX53Q86TM3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX53Q86TM3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX53Q86TM3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
DDX53Q86TM3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.94■■□□□ 1.74
DDX53Q86TM3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.94■■□□□ 1.74
DDX53Q86TM3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
DDX53Q86TM3 KRT18P10-201ENST00000388836 1287 ntBASIC25.93■■□□□ 1.74
DDX53Q86TM3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.93■■□□□ 1.74
DDX53Q86TM3 THA1P-201ENST00000590384 1145 ntBASIC25.93■■□□□ 1.74
DDX53Q86TM3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX53Q86TM3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX53Q86TM3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX53Q86TM3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.92■■□□□ 1.74
DDX53Q86TM3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.92■■□□□ 1.74
DDX53Q86TM3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.92■■□□□ 1.74
DDX53Q86TM3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
DDX53Q86TM3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
DDX53Q86TM3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX53Q86TM3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX53Q86TM3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.9■■□□□ 1.74
DDX53Q86TM3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX53Q86TM3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.9■■□□□ 1.74
DDX53Q86TM3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX53Q86TM3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
DDX53Q86TM3 LINC01003-201ENST00000564834 1764 ntBASIC25.9■■□□□ 1.74
DDX53Q86TM3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
DDX53Q86TM3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
DDX53Q86TM3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
DDX53Q86TM3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
DDX53Q86TM3 AC239859.2-201ENST00000444165 318 ntBASIC25.89■■□□□ 1.74
DDX53Q86TM3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.89■■□□□ 1.74
DDX53Q86TM3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX53Q86TM3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX53Q86TM3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX53Q86TM3 Z92544.1-202ENST00000571933 1220 ntBASIC25.88■■□□□ 1.73
DDX53Q86TM3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX53Q86TM3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.87■■□□□ 1.73
DDX53Q86TM3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.87■■□□□ 1.73
DDX53Q86TM3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX53Q86TM3 AL356441.2-201ENST00000443009 864 ntBASIC25.87■■□□□ 1.73
DDX53Q86TM3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX53Q86TM3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.87■■□□□ 1.73
DDX53Q86TM3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.87■■□□□ 1.73
DDX53Q86TM3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX53Q86TM3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.86■■□□□ 1.73
DDX53Q86TM3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
DDX53Q86TM3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.86■■□□□ 1.73
DDX53Q86TM3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DDX53Q86TM3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DDX53Q86TM3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX53Q86TM3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.85■■□□□ 1.73
DDX53Q86TM3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.84■■□□□ 1.73
DDX53Q86TM3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
DDX53Q86TM3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX53Q86TM3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
DDX53Q86TM3 AC022616.5-201ENST00000518796 181 ntBASIC25.84■■□□□ 1.73
DDX53Q86TM3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX53Q86TM3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
DDX53Q86TM3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX53Q86TM3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.84■■□□□ 1.73
DDX53Q86TM3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX53Q86TM3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX53Q86TM3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.83■■□□□ 1.73
DDX53Q86TM3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
DDX53Q86TM3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX53Q86TM3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
DDX53Q86TM3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX53Q86TM3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
DDX53Q86TM3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.82■■□□□ 1.72
DDX53Q86TM3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.82■■□□□ 1.72
DDX53Q86TM3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX53Q86TM3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX53Q86TM3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
DDX53Q86TM3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.81■■□□□ 1.72
DDX53Q86TM3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.81■■□□□ 1.72
DDX53Q86TM3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
DDX53Q86TM3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.8■■□□□ 1.72
DDX53Q86TM3 AC139426.1-201ENST00000568218 2529 ntBASIC25.8■■□□□ 1.72
DDX53Q86TM3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX53Q86TM3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
DDX53Q86TM3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.8■■□□□ 1.72
DDX53Q86TM3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
DDX53Q86TM3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX53Q86TM3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.8■■□□□ 1.72
DDX53Q86TM3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
DDX53Q86TM3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
DDX53Q86TM3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX53Q86TM3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.79■■□□□ 1.72
DDX53Q86TM3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
DDX53Q86TM3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.79■■□□□ 1.72
DDX53Q86TM3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX53Q86TM3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX53Q86TM3 BX255925.1-201ENST00000566954 1854 ntBASIC25.79■■□□□ 1.72
DDX53Q86TM3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.78■■□□□ 1.72
DDX53Q86TM3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms