Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 AL157400.5-201ENST00000507624 621 ntBASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 AC010501.1-201ENST00000606270 1962 ntBASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
FAM53AQ6NSI3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FAM53AQ6NSI3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20■□□□□ 0.79
FAM53AQ6NSI3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FAM53AQ6NSI3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20■□□□□ 0.79
FAM53AQ6NSI3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
FAM53AQ6NSI3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20■□□□□ 0.79
FAM53AQ6NSI3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FAM53AQ6NSI3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
FAM53AQ6NSI3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FAM53AQ6NSI3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FAM53AQ6NSI3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20■□□□□ 0.79
FAM53AQ6NSI3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM53AQ6NSI3 AC060814.1-201ENST00000554326 538 ntBASIC19.99■□□□□ 0.79
FAM53AQ6NSI3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.99■□□□□ 0.79
FAM53AQ6NSI3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM53AQ6NSI3 AC096887.2-201ENST00000623443 1957 ntBASIC19.99■□□□□ 0.79
FAM53AQ6NSI3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
FAM53AQ6NSI3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FAM53AQ6NSI3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FAM53AQ6NSI3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FAM53AQ6NSI3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.97■□□□□ 0.79
FAM53AQ6NSI3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FAM53AQ6NSI3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
FAM53AQ6NSI3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
FAM53AQ6NSI3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FAM53AQ6NSI3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FAM53AQ6NSI3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
FAM53AQ6NSI3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FAM53AQ6NSI3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
FAM53AQ6NSI3 AC126177.7-201ENST00000547904 679 ntBASIC19.96■□□□□ 0.79
FAM53AQ6NSI3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.96■□□□□ 0.79
FAM53AQ6NSI3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FAM53AQ6NSI3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
FAM53AQ6NSI3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FAM53AQ6NSI3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM53AQ6NSI3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FAM53AQ6NSI3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM53AQ6NSI3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
FAM53AQ6NSI3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
FAM53AQ6NSI3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM53AQ6NSI3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.94■□□□□ 0.78
FAM53AQ6NSI3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FAM53AQ6NSI3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.94■□□□□ 0.78
FAM53AQ6NSI3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.94■□□□□ 0.78
FAM53AQ6NSI3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.94■□□□□ 0.78
FAM53AQ6NSI3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FAM53AQ6NSI3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FAM53AQ6NSI3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FAM53AQ6NSI3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
FAM53AQ6NSI3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM53AQ6NSI3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.93■□□□□ 0.78
FAM53AQ6NSI3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.93■□□□□ 0.78
FAM53AQ6NSI3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.93■□□□□ 0.78
FAM53AQ6NSI3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FAM53AQ6NSI3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM53AQ6NSI3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FAM53AQ6NSI3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
FAM53AQ6NSI3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FAM53AQ6NSI3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.92■□□□□ 0.78
FAM53AQ6NSI3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FAM53AQ6NSI3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FAM53AQ6NSI3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FAM53AQ6NSI3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FAM53AQ6NSI3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.92■□□□□ 0.78
FAM53AQ6NSI3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.92■□□□□ 0.78
FAM53AQ6NSI3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FAM53AQ6NSI3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FAM53AQ6NSI3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
FAM53AQ6NSI3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
FAM53AQ6NSI3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FAM53AQ6NSI3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.9■□□□□ 0.78
FAM53AQ6NSI3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FAM53AQ6NSI3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FAM53AQ6NSI3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.89■□□□□ 0.77
FAM53AQ6NSI3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FAM53AQ6NSI3 AC022413.1-201ENST00000624602 984 ntBASIC19.89■□□□□ 0.77
FAM53AQ6NSI3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FAM53AQ6NSI3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FAM53AQ6NSI3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FAM53AQ6NSI3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
FAM53AQ6NSI3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FAM53AQ6NSI3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.88■□□□□ 0.77
FAM53AQ6NSI3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.88■□□□□ 0.77
FAM53AQ6NSI3 AC092296.2-201ENST00000589470 999 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms