Protein–RNA interactions for Protein: Q5JS37

NHLRC3, NHL repeat-containing protein 3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3Q5JS37 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NHLRC3Q5JS37 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NHLRC3Q5JS37 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NHLRC3Q5JS37 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NHLRC3Q5JS37 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.74■□□□□ 0.91
NHLRC3Q5JS37 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.74■□□□□ 0.91
NHLRC3Q5JS37 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NHLRC3Q5JS37 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NHLRC3Q5JS37 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NHLRC3Q5JS37 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.73■□□□□ 0.91
NHLRC3Q5JS37 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NHLRC3Q5JS37 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.73■□□□□ 0.91
NHLRC3Q5JS37 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.73■□□□□ 0.91
NHLRC3Q5JS37 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.73■□□□□ 0.91
NHLRC3Q5JS37 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
NHLRC3Q5JS37 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.73■□□□□ 0.91
NHLRC3Q5JS37 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NHLRC3Q5JS37 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NHLRC3Q5JS37 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NHLRC3Q5JS37 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NHLRC3Q5JS37 MIR219A2-201ENST00000608502 1504 ntBASIC20.71■□□□□ 0.91
NHLRC3Q5JS37 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NHLRC3Q5JS37 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NHLRC3Q5JS37 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NHLRC3Q5JS37 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NHLRC3Q5JS37 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NHLRC3Q5JS37 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NHLRC3Q5JS37 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NHLRC3Q5JS37 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NHLRC3Q5JS37 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NHLRC3Q5JS37 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NHLRC3Q5JS37 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NHLRC3Q5JS37 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NHLRC3Q5JS37 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.69■□□□□ 0.9
NHLRC3Q5JS37 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NHLRC3Q5JS37 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NHLRC3Q5JS37 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.68■□□□□ 0.9
NHLRC3Q5JS37 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.68■□□□□ 0.9
NHLRC3Q5JS37 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NHLRC3Q5JS37 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.67■□□□□ 0.9
NHLRC3Q5JS37 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NHLRC3Q5JS37 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NHLRC3Q5JS37 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NHLRC3Q5JS37 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NHLRC3Q5JS37 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.67■□□□□ 0.9
NHLRC3Q5JS37 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
NHLRC3Q5JS37 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.67■□□□□ 0.9
NHLRC3Q5JS37 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.67■□□□□ 0.9
NHLRC3Q5JS37 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NHLRC3Q5JS37 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NHLRC3Q5JS37 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NHLRC3Q5JS37 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NHLRC3Q5JS37 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NHLRC3Q5JS37 ZNRF2P2-203ENST00000454624 420 ntBASIC20.66■□□□□ 0.9
NHLRC3Q5JS37 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.66■□□□□ 0.9
NHLRC3Q5JS37 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.66■□□□□ 0.9
NHLRC3Q5JS37 CLDN5-201ENST00000403084 2357 ntBASIC20.65■□□□□ 0.9
NHLRC3Q5JS37 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NHLRC3Q5JS37 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NHLRC3Q5JS37 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NHLRC3Q5JS37 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.65■□□□□ 0.9
NHLRC3Q5JS37 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NHLRC3Q5JS37 AC079834.2-201ENST00000609776 1949 ntBASIC20.65■□□□□ 0.9
NHLRC3Q5JS37 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NHLRC3Q5JS37 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
NHLRC3Q5JS37 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NHLRC3Q5JS37 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NHLRC3Q5JS37 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.64■□□□□ 0.89
NHLRC3Q5JS37 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NHLRC3Q5JS37 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NHLRC3Q5JS37 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.64■□□□□ 0.89
NHLRC3Q5JS37 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.64■□□□□ 0.89
NHLRC3Q5JS37 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NHLRC3Q5JS37 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NHLRC3Q5JS37 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NHLRC3Q5JS37 AC010501.1-201ENST00000606270 1962 ntBASIC20.63■□□□□ 0.89
NHLRC3Q5JS37 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
NHLRC3Q5JS37 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NHLRC3Q5JS37 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NHLRC3Q5JS37 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
NHLRC3Q5JS37 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NHLRC3Q5JS37 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.62■□□□□ 0.89
NHLRC3Q5JS37 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC3Q5JS37 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC3Q5JS37 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NHLRC3Q5JS37 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.61■□□□□ 0.89
NHLRC3Q5JS37 HLA-V-202ENST00000446817 847 ntBASIC20.61■□□□□ 0.89
NHLRC3Q5JS37 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NHLRC3Q5JS37 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms