Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.68■□□□□ 0.58
TM4SF20Q53R12 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TM4SF20Q53R12 SMPD5-203ENST00000639008 1464 ntBASIC18.67■□□□□ 0.58
TM4SF20Q53R12 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.67■□□□□ 0.58
TM4SF20Q53R12 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF20Q53R12 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF20Q53R12 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF20Q53R12 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF20Q53R12 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF20Q53R12 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF20Q53R12 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TM4SF20Q53R12 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TM4SF20Q53R12 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.66■□□□□ 0.58
TM4SF20Q53R12 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.66■□□□□ 0.58
TM4SF20Q53R12 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.66■□□□□ 0.58
TM4SF20Q53R12 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TM4SF20Q53R12 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF20Q53R12 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TM4SF20Q53R12 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF20Q53R12 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF20Q53R12 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TM4SF20Q53R12 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TM4SF20Q53R12 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
TM4SF20Q53R12 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF20Q53R12 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF20Q53R12 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF20Q53R12 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.64■□□□□ 0.57
TM4SF20Q53R12 AC025884.2-201ENST00000553429 711 ntBASIC18.64■□□□□ 0.57
TM4SF20Q53R12 RNF126P1-201ENST00000567452 1320 ntBASIC18.64■□□□□ 0.57
TM4SF20Q53R12 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.64■□□□□ 0.57
TM4SF20Q53R12 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.64■□□□□ 0.57
TM4SF20Q53R12 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF20Q53R12 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.63■□□□□ 0.57
TM4SF20Q53R12 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF20Q53R12 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.62■□□□□ 0.57
TM4SF20Q53R12 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF20Q53R12 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF20Q53R12 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.62■□□□□ 0.57
TM4SF20Q53R12 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF20Q53R12 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF20Q53R12 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF20Q53R12 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF20Q53R12 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.61■□□□□ 0.57
TM4SF20Q53R12 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF20Q53R12 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TM4SF20Q53R12 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF20Q53R12 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
TM4SF20Q53R12 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.61■□□□□ 0.57
TM4SF20Q53R12 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF20Q53R12 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF20Q53R12 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF20Q53R12 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.6■□□□□ 0.57
TM4SF20Q53R12 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.6■□□□□ 0.57
TM4SF20Q53R12 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.6■□□□□ 0.57
TM4SF20Q53R12 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF20Q53R12 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF20Q53R12 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF20Q53R12 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.59■□□□□ 0.57
TM4SF20Q53R12 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF20Q53R12 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
TM4SF20Q53R12 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF20Q53R12 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF20Q53R12 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.59■□□□□ 0.57
TM4SF20Q53R12 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.59■□□□□ 0.57
TM4SF20Q53R12 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.59■□□□□ 0.57
TM4SF20Q53R12 MIR3960-201ENST00000583311 91 ntBASIC18.59■□□□□ 0.57
TM4SF20Q53R12 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF20Q53R12 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TM4SF20Q53R12 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TM4SF20Q53R12 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TM4SF20Q53R12 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TM4SF20Q53R12 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.57■□□□□ 0.56
TM4SF20Q53R12 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF20Q53R12 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF20Q53R12 RARRES2P2-201ENST00000394842 485 ntBASIC18.57■□□□□ 0.56
TM4SF20Q53R12 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF20Q53R12 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.57■□□□□ 0.56
TM4SF20Q53R12 AC007029.1-201ENST00000604183 313 ntBASIC18.57■□□□□ 0.56
TM4SF20Q53R12 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF20Q53R12 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF20Q53R12 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF20Q53R12 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF20Q53R12 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TM4SF20Q53R12 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF20Q53R12 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TM4SF20Q53R12 RP9P-202ENST00000450133 1212 ntBASIC18.55■□□□□ 0.56
TM4SF20Q53R12 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF20Q53R12 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms