Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RSPO1Q2MKA7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RSPO1Q2MKA7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.1■□□□□ 0.97
RSPO1Q2MKA7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.1■□□□□ 0.97
RSPO1Q2MKA7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.1■□□□□ 0.97
RSPO1Q2MKA7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RSPO1Q2MKA7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RSPO1Q2MKA7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RSPO1Q2MKA7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.09■□□□□ 0.97
RSPO1Q2MKA7 SMPD5-203ENST00000639008 1464 ntBASIC21.09■□□□□ 0.97
RSPO1Q2MKA7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.09■□□□□ 0.97
RSPO1Q2MKA7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RSPO1Q2MKA7 AC020928.2-201ENST00000588717 2197 ntBASIC21.09■□□□□ 0.97
RSPO1Q2MKA7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.08■□□□□ 0.97
RSPO1Q2MKA7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RSPO1Q2MKA7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RSPO1Q2MKA7 ECEL1P2-201ENST00000461596 1295 ntBASIC21.08■□□□□ 0.97
RSPO1Q2MKA7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.08■□□□□ 0.97
RSPO1Q2MKA7 AC096887.2-201ENST00000623443 1957 ntBASIC21.08■□□□□ 0.96
RSPO1Q2MKA7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RSPO1Q2MKA7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.07■□□□□ 0.96
RSPO1Q2MKA7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.06■□□□□ 0.96
RSPO1Q2MKA7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RSPO1Q2MKA7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RSPO1Q2MKA7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO1Q2MKA7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO1Q2MKA7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO1Q2MKA7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.04■□□□□ 0.96
RSPO1Q2MKA7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO1Q2MKA7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO1Q2MKA7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO1Q2MKA7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.03■□□□□ 0.96
RSPO1Q2MKA7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO1Q2MKA7 GPX1-201ENST00000419349 1106 ntBASIC21.03■□□□□ 0.96
RSPO1Q2MKA7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO1Q2MKA7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO1Q2MKA7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.03■□□□□ 0.96
RSPO1Q2MKA7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO1Q2MKA7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO1Q2MKA7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
RSPO1Q2MKA7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RSPO1Q2MKA7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RSPO1Q2MKA7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RSPO1Q2MKA7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RSPO1Q2MKA7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
RSPO1Q2MKA7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RSPO1Q2MKA7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.02■□□□□ 0.96
RSPO1Q2MKA7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RSPO1Q2MKA7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RSPO1Q2MKA7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RSPO1Q2MKA7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.01■□□□□ 0.95
RSPO1Q2MKA7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RSPO1Q2MKA7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RSPO1Q2MKA7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
RSPO1Q2MKA7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RSPO1Q2MKA7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RSPO1Q2MKA7 MIR3960-201ENST00000583311 91 ntBASIC21■□□□□ 0.95
RSPO1Q2MKA7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RSPO1Q2MKA7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21■□□□□ 0.95
RSPO1Q2MKA7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21■□□□□ 0.95
RSPO1Q2MKA7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RSPO1Q2MKA7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RSPO1Q2MKA7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
RSPO1Q2MKA7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.99■□□□□ 0.95
RSPO1Q2MKA7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RSPO1Q2MKA7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RSPO1Q2MKA7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RSPO1Q2MKA7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.98■□□□□ 0.95
RSPO1Q2MKA7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.98■□□□□ 0.95
RSPO1Q2MKA7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO1Q2MKA7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
RSPO1Q2MKA7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RSPO1Q2MKA7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RSPO1Q2MKA7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RSPO1Q2MKA7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
RSPO1Q2MKA7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.96■□□□□ 0.95
RSPO1Q2MKA7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RSPO1Q2MKA7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.96■□□□□ 0.95
RSPO1Q2MKA7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RSPO1Q2MKA7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RSPO1Q2MKA7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RSPO1Q2MKA7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.95■□□□□ 0.94
RSPO1Q2MKA7 RP9P-202ENST00000450133 1212 ntBASIC20.95■□□□□ 0.94
RSPO1Q2MKA7 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.95■□□□□ 0.94
RSPO1Q2MKA7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.95■□□□□ 0.94
RSPO1Q2MKA7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms