Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H1AQ02539 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H1AQ02539 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H1AQ02539 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1AQ02539 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1AQ02539 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.3■□□□□ 0.52
HIST1H1AQ02539 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1AQ02539 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1AQ02539 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 CR559946.2-201ENST00000623684 991 ntBASIC18.29■□□□□ 0.52
HIST1H1AQ02539 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1AQ02539 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1AQ02539 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H1AQ02539 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
HIST1H1AQ02539 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H1AQ02539 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HIST1H1AQ02539 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H1AQ02539 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H1AQ02539 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H1AQ02539 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H1AQ02539 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
HIST1H1AQ02539 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HIST1H1AQ02539 AL359258.2-201ENST00000564063 1566 ntBASIC18.26■□□□□ 0.51
HIST1H1AQ02539 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1AQ02539 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST1H1AQ02539 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1AQ02539 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1AQ02539 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1AQ02539 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1AQ02539 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST1H1AQ02539 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.26■□□□□ 0.51
HIST1H1AQ02539 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1AQ02539 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1AQ02539 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1AQ02539 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1AQ02539 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1AQ02539 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1AQ02539 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1AQ02539 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HIST1H1AQ02539 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1AQ02539 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1AQ02539 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1AQ02539 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST1H1AQ02539 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST1H1AQ02539 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.24■□□□□ 0.51
HIST1H1AQ02539 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1AQ02539 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST1H1AQ02539 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1AQ02539 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST1H1AQ02539 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.24■□□□□ 0.51
HIST1H1AQ02539 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1AQ02539 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST1H1AQ02539 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1AQ02539 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1AQ02539 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1AQ02539 MIR3648-2-201ENST00000581792 180 ntBASIC18.22■□□□□ 0.51
HIST1H1AQ02539 MIR3648-1-201ENST00000615959 180 ntBASIC18.22■□□□□ 0.51
HIST1H1AQ02539 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HIST1H1AQ02539 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1AQ02539 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
HIST1H1AQ02539 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 330.9 ms