Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.98■■□□□ 1.11
CDC42P60953 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42P60953 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42P60953 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42P60953 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42P60953 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CDC42P60953 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42P60953 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42P60953 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42P60953 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42P60953 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42P60953 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.96■■□□□ 1.11
CDC42P60953 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42P60953 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.96■■□□□ 1.11
CDC42P60953 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDC42P60953 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42P60953 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42P60953 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
CDC42P60953 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42P60953 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CDC42P60953 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42P60953 AC096887.2-201ENST00000623443 1957 ntBASIC21.95■■□□□ 1.1
CDC42P60953 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC42P60953 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC42P60953 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42P60953 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42P60953 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42P60953 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.94■■□□□ 1.1
CDC42P60953 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42P60953 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC42P60953 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42P60953 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC42P60953 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
CDC42P60953 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
CDC42P60953 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CDC42P60953 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDC42P60953 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42P60953 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42P60953 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42P60953 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42P60953 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CDC42P60953 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC42P60953 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42P60953 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CDC42P60953 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42P60953 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42P60953 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.91■■□□□ 1.1
CDC42P60953 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42P60953 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42P60953 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CDC42P60953 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42P60953 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42P60953 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42P60953 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42P60953 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.9■■□□□ 1.1
CDC42P60953 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42P60953 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42P60953 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42P60953 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CDC42P60953 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42P60953 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC42P60953 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42P60953 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42P60953 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42P60953 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42P60953 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.89■■□□□ 1.09
CDC42P60953 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.89■■□□□ 1.09
CDC42P60953 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42P60953 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CDC42P60953 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42P60953 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42P60953 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42P60953 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.88■■□□□ 1.09
CDC42P60953 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42P60953 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CDC42P60953 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42P60953 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42P60953 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDC42P60953 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42P60953 AP006261.1-201ENST00000584783 668 ntBASIC21.87■■□□□ 1.09
CDC42P60953 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42P60953 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42P60953 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42P60953 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42P60953 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42P60953 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42P60953 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CDC42P60953 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.86■■□□□ 1.09
CDC42P60953 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CDC42P60953 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42P60953 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42P60953 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.86■■□□□ 1.09
CDC42P60953 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42P60953 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.85■■□□□ 1.09
CDC42P60953 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42P60953 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42P60953 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42P60953 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.84■■□□□ 1.09
CDC42P60953 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.84■■□□□ 1.09
CDC42P60953 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms