Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.5■□□□□ 0.87
MECP2P51608 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MECP2P51608 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MECP2P51608 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.5■□□□□ 0.87
MECP2P51608 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.5■□□□□ 0.87
MECP2P51608 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MECP2P51608 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MECP2P51608 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
MECP2P51608 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MECP2P51608 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MECP2P51608 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.49■□□□□ 0.87
MECP2P51608 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MECP2P51608 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MECP2P51608 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MECP2P51608 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.49■□□□□ 0.87
MECP2P51608 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MECP2P51608 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MECP2P51608 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.48■□□□□ 0.87
MECP2P51608 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.47■□□□□ 0.87
MECP2P51608 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
MECP2P51608 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
MECP2P51608 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MECP2P51608 MIR762-201ENST00000390236 83 ntBASIC20.47■□□□□ 0.87
MECP2P51608 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
MECP2P51608 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.47■□□□□ 0.87
MECP2P51608 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MECP2P51608 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.47■□□□□ 0.87
MECP2P51608 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MECP2P51608 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
MECP2P51608 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.46■□□□□ 0.87
MECP2P51608 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.46■□□□□ 0.87
MECP2P51608 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MECP2P51608 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.46■□□□□ 0.87
MECP2P51608 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MECP2P51608 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MECP2P51608 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
MECP2P51608 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
MECP2P51608 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
MECP2P51608 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MECP2P51608 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
MECP2P51608 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MECP2P51608 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.45■□□□□ 0.86
MECP2P51608 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
MECP2P51608 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MECP2P51608 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MECP2P51608 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MECP2P51608 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
MECP2P51608 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
MECP2P51608 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MECP2P51608 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MECP2P51608 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
MECP2P51608 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.44■□□□□ 0.86
MECP2P51608 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MECP2P51608 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MECP2P51608 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MECP2P51608 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MECP2P51608 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MECP2P51608 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
MECP2P51608 WHAMMP2-203ENST00000563942 1603 ntBASIC20.43■□□□□ 0.86
MECP2P51608 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.43■□□□□ 0.86
MECP2P51608 AP006261.1-201ENST00000584783 668 ntBASIC20.43■□□□□ 0.86
MECP2P51608 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.43■□□□□ 0.86
MECP2P51608 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.43■□□□□ 0.86
MECP2P51608 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MECP2P51608 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
MECP2P51608 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.43■□□□□ 0.86
MECP2P51608 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MECP2P51608 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MECP2P51608 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
MECP2P51608 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.42■□□□□ 0.86
MECP2P51608 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MECP2P51608 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MECP2P51608 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.42■□□□□ 0.86
MECP2P51608 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
MECP2P51608 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MECP2P51608 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MECP2P51608 AC097639.1-201ENST00000565519 1891 ntBASIC20.41■□□□□ 0.86
MECP2P51608 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.41■□□□□ 0.86
MECP2P51608 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
MECP2P51608 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MECP2P51608 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MECP2P51608 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MECP2P51608 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
MECP2P51608 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.4■□□□□ 0.86
MECP2P51608 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
MECP2P51608 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MECP2P51608 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MECP2P51608 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
MECP2P51608 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MECP2P51608 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MECP2P51608 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.39■□□□□ 0.85
MECP2P51608 AC005559.1-201ENST00000589661 871 ntBASIC20.39■□□□□ 0.85
MECP2P51608 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MECP2P51608 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.39■□□□□ 0.85
MECP2P51608 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MECP2P51608 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.39■□□□□ 0.85
MECP2P51608 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MECP2P51608 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MECP2P51608 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MECP2P51608 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms