Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC1P07992 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC1P07992 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC1P07992 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.25■□□□□ 0.99
ERCC1P07992 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC1P07992 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC1P07992 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC1P07992 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.24■□□□□ 0.99
ERCC1P07992 AC092296.2-201ENST00000589470 999 ntBASIC21.24■□□□□ 0.99
ERCC1P07992 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC1P07992 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC1P07992 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC1P07992 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.23■□□□□ 0.99
ERCC1P07992 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC1P07992 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ERCC1P07992 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC1P07992 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC1P07992 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ERCC1P07992 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.22■□□□□ 0.99
ERCC1P07992 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC1P07992 NTF6A-201ENST00000591175 560 ntBASIC21.22■□□□□ 0.99
ERCC1P07992 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC1P07992 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC1P07992 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC1P07992 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.21■□□□□ 0.99
ERCC1P07992 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC1P07992 AL359258.2-201ENST00000564063 1566 ntBASIC21.21■□□□□ 0.99
ERCC1P07992 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ERCC1P07992 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.21■□□□□ 0.99
ERCC1P07992 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
ERCC1P07992 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
ERCC1P07992 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC1P07992 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC1P07992 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.2■□□□□ 0.98
ERCC1P07992 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.2■□□□□ 0.98
ERCC1P07992 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.2■□□□□ 0.98
ERCC1P07992 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ERCC1P07992 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.2■□□□□ 0.98
ERCC1P07992 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC1P07992 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC1P07992 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC1P07992 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC1P07992 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC1P07992 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ERCC1P07992 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC1P07992 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ERCC1P07992 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC1P07992 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC1P07992 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC1P07992 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC1P07992 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC1P07992 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ERCC1P07992 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC1P07992 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC1P07992 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC1P07992 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC1P07992 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC1P07992 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC1P07992 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC1P07992 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC1P07992 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.18■□□□□ 0.98
ERCC1P07992 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC1P07992 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC1P07992 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC1P07992 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC1P07992 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC1P07992 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC1P07992 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.17■□□□□ 0.98
ERCC1P07992 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC1P07992 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC1P07992 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
ERCC1P07992 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.16■□□□□ 0.98
ERCC1P07992 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.16■□□□□ 0.98
ERCC1P07992 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.16■□□□□ 0.98
ERCC1P07992 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ERCC1P07992 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC1P07992 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.16■□□□□ 0.98
ERCC1P07992 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC1P07992 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC1P07992 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.16■□□□□ 0.98
ERCC1P07992 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC1P07992 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.15■□□□□ 0.98
ERCC1P07992 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.15■□□□□ 0.98
ERCC1P07992 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.15■□□□□ 0.98
ERCC1P07992 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
ERCC1P07992 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC1P07992 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.14■□□□□ 0.98
ERCC1P07992 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.14■□□□□ 0.97
ERCC1P07992 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERCC1P07992 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.14■□□□□ 0.97
ERCC1P07992 AC012354.3-201ENST00000623734 483 ntBASIC21.14■□□□□ 0.97
ERCC1P07992 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ERCC1P07992 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERCC1P07992 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC1P07992 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC1P07992 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC1P07992 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC1P07992 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.13■□□□□ 0.97
ERCC1P07992 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC1P07992 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms