Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MT-ND1P03886 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MT-ND1P03886 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
MT-ND1P03886 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MT-ND1P03886 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MT-ND1P03886 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MT-ND1P03886 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MT-ND1P03886 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MT-ND1P03886 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MT-ND1P03886 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
MT-ND1P03886 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
MT-ND1P03886 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
MT-ND1P03886 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MT-ND1P03886 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MT-ND1P03886 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
MT-ND1P03886 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.65■■□□□ 1.22
MT-ND1P03886 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.65■■□□□ 1.22
MT-ND1P03886 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
MT-ND1P03886 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
MT-ND1P03886 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.65■■□□□ 1.22
MT-ND1P03886 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
MT-ND1P03886 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
MT-ND1P03886 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MT-ND1P03886 RPS2P35-201ENST00000443417 897 ntBASIC22.64■■□□□ 1.21
MT-ND1P03886 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.64■■□□□ 1.21
MT-ND1P03886 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MT-ND1P03886 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
MT-ND1P03886 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MT-ND1P03886 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.63■■□□□ 1.21
MT-ND1P03886 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MT-ND1P03886 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.63■■□□□ 1.21
MT-ND1P03886 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MT-ND1P03886 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.63■■□□□ 1.21
MT-ND1P03886 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.63■■□□□ 1.21
MT-ND1P03886 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND1P03886 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND1P03886 AC096887.2-201ENST00000623443 1957 ntBASIC22.62■■□□□ 1.21
MT-ND1P03886 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND1P03886 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND1P03886 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.62■■□□□ 1.21
MT-ND1P03886 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND1P03886 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.62■■□□□ 1.21
MT-ND1P03886 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MT-ND1P03886 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.61■■□□□ 1.21
MT-ND1P03886 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MT-ND1P03886 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MT-ND1P03886 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MT-ND1P03886 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MT-ND1P03886 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.61■■□□□ 1.21
MT-ND1P03886 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MT-ND1P03886 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.61■■□□□ 1.21
MT-ND1P03886 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MT-ND1P03886 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.6■■□□□ 1.21
MT-ND1P03886 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
MT-ND1P03886 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MT-ND1P03886 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.59■■□□□ 1.21
MT-ND1P03886 AC133561.1-201ENST00000568600 2415 ntBASIC22.59■■□□□ 1.21
MT-ND1P03886 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MT-ND1P03886 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
MT-ND1P03886 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.59■■□□□ 1.21
MT-ND1P03886 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.59■■□□□ 1.21
MT-ND1P03886 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.59■■□□□ 1.21
MT-ND1P03886 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.59■■□□□ 1.21
MT-ND1P03886 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
MT-ND1P03886 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
MT-ND1P03886 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MT-ND1P03886 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
MT-ND1P03886 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
MT-ND1P03886 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
MT-ND1P03886 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MT-ND1P03886 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.58■■□□□ 1.21
MT-ND1P03886 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.58■■□□□ 1.2
MT-ND1P03886 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
MT-ND1P03886 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
MT-ND1P03886 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND1P03886 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND1P03886 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND1P03886 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.57■■□□□ 1.2
MT-ND1P03886 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-ND1P03886 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.57■■□□□ 1.2
MT-ND1P03886 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.57■■□□□ 1.2
MT-ND1P03886 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.57■■□□□ 1.2
MT-ND1P03886 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
MT-ND1P03886 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
MT-ND1P03886 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.57■■□□□ 1.2
MT-ND1P03886 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.56■■□□□ 1.2
MT-ND1P03886 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.56■■□□□ 1.2
MT-ND1P03886 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MT-ND1P03886 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MT-ND1P03886 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.56■■□□□ 1.2
MT-ND1P03886 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MT-ND1P03886 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
MT-ND1P03886 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MT-ND1P03886 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.55■■□□□ 1.2
MT-ND1P03886 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MT-ND1P03886 LINC01971-201ENST00000617888 1048 ntBASIC22.55■■□□□ 1.2
MT-ND1P03886 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
MT-ND1P03886 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
MT-ND1P03886 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MT-ND1P03886 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms