Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
CLPXO76031 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLPXO76031 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPXO76031 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPXO76031 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPXO76031 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPXO76031 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPXO76031 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLPXO76031 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CLPXO76031 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.77■■□□□ 1.08
CLPXO76031 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.77■■□□□ 1.08
CLPXO76031 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CLPXO76031 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CLPXO76031 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CLPXO76031 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLPXO76031 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.76■■□□□ 1.07
CLPXO76031 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.76■■□□□ 1.07
CLPXO76031 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLPXO76031 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPXO76031 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLPXO76031 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CLPXO76031 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLPXO76031 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLPXO76031 WHAMMP3-201ENST00000611636 1609 ntBASIC21.75■■□□□ 1.07
CLPXO76031 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLPXO76031 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLPXO76031 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.75■■□□□ 1.07
CLPXO76031 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CLPXO76031 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPXO76031 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPXO76031 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.74■■□□□ 1.07
CLPXO76031 AC005559.1-201ENST00000589661 871 ntBASIC21.74■■□□□ 1.07
CLPXO76031 AC097639.1-201ENST00000565519 1891 ntBASIC21.74■■□□□ 1.07
CLPXO76031 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPXO76031 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPXO76031 AC010501.1-201ENST00000606270 1962 ntBASIC21.74■■□□□ 1.07
CLPXO76031 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPXO76031 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLPXO76031 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLPXO76031 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.73■■□□□ 1.07
CLPXO76031 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLPXO76031 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLPXO76031 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLPXO76031 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLPXO76031 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLPXO76031 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLPXO76031 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLPXO76031 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.72■■□□□ 1.07
CLPXO76031 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPXO76031 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLPXO76031 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.72■■□□□ 1.07
CLPXO76031 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CLPXO76031 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPXO76031 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPXO76031 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPXO76031 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPXO76031 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPXO76031 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
CLPXO76031 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPXO76031 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPXO76031 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPXO76031 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPXO76031 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.71■■□□□ 1.07
CLPXO76031 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPXO76031 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.71■■□□□ 1.07
CLPXO76031 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPXO76031 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPXO76031 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPXO76031 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLPXO76031 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPXO76031 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLPXO76031 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPXO76031 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPXO76031 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPXO76031 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPXO76031 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPXO76031 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPXO76031 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPXO76031 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLPXO76031 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLPXO76031 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CLPXO76031 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPXO76031 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPXO76031 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPXO76031 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPXO76031 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CLPXO76031 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CLPXO76031 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
CLPXO76031 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPXO76031 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPXO76031 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPXO76031 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPXO76031 DUSP8P5-201ENST00000422884 1815 ntBASIC21.67■■□□□ 1.06
CLPXO76031 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLPXO76031 AC087741.3-201ENST00000624270 1347 ntBASIC21.67■■□□□ 1.06
CLPXO76031 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.67■■□□□ 1.06
CLPXO76031 LINC01124-201ENST00000409786 2117 ntBASIC21.67■■□□□ 1.06
CLPXO76031 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.66■■□□□ 1.06
CLPXO76031 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLPXO76031 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms