Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SHISA7A6NL88 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SHISA7A6NL88 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.84■■□□□ 1.57
SHISA7A6NL88 UNC93B8-201ENST00000511903 705 ntBASIC24.84■■□□□ 1.57
SHISA7A6NL88 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SHISA7A6NL88 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
SHISA7A6NL88 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.83■■□□□ 1.57
SHISA7A6NL88 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.83■■□□□ 1.57
SHISA7A6NL88 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHISA7A6NL88 AC008406.3-201ENST00000620001 1374 ntBASIC24.82■■□□□ 1.56
SHISA7A6NL88 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
SHISA7A6NL88 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHISA7A6NL88 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.82■■□□□ 1.56
SHISA7A6NL88 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.82■■□□□ 1.56
SHISA7A6NL88 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHISA7A6NL88 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.81■■□□□ 1.56
SHISA7A6NL88 MIR935-201ENST00000401179 91 ntBASIC24.81■■□□□ 1.56
SHISA7A6NL88 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.81■■□□□ 1.56
SHISA7A6NL88 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.81■■□□□ 1.56
SHISA7A6NL88 MIR4787-201ENST00000607364 84 ntBASIC24.81■■□□□ 1.56
SHISA7A6NL88 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SHISA7A6NL88 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHISA7A6NL88 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
SHISA7A6NL88 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SHISA7A6NL88 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.8■■□□□ 1.56
SHISA7A6NL88 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SHISA7A6NL88 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SHISA7A6NL88 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
SHISA7A6NL88 ABCB10P1-201ENST00000614297 2181 ntBASIC24.8■■□□□ 1.56
SHISA7A6NL88 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SHISA7A6NL88 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
SHISA7A6NL88 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
SHISA7A6NL88 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.79■■□□□ 1.56
SHISA7A6NL88 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
SHISA7A6NL88 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.79■■□□□ 1.56
SHISA7A6NL88 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
SHISA7A6NL88 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SHISA7A6NL88 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.78■■□□□ 1.56
SHISA7A6NL88 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.78■■□□□ 1.56
SHISA7A6NL88 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
SHISA7A6NL88 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
SHISA7A6NL88 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.78■■□□□ 1.56
SHISA7A6NL88 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SHISA7A6NL88 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SHISA7A6NL88 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
SHISA7A6NL88 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SHISA7A6NL88 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SHISA7A6NL88 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.77■■□□□ 1.56
SHISA7A6NL88 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.77■■□□□ 1.56
SHISA7A6NL88 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SHISA7A6NL88 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SHISA7A6NL88 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.76■■□□□ 1.55
SHISA7A6NL88 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SHISA7A6NL88 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SHISA7A6NL88 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SHISA7A6NL88 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.75■■□□□ 1.55
SHISA7A6NL88 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.75■■□□□ 1.55
SHISA7A6NL88 KRT18P24-201ENST00000344739 1156 ntBASIC24.74■■□□□ 1.55
SHISA7A6NL88 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.74■■□□□ 1.55
SHISA7A6NL88 KRT125P-201ENST00000546827 989 ntBASIC24.74■■□□□ 1.55
SHISA7A6NL88 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.74■■□□□ 1.55
SHISA7A6NL88 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SHISA7A6NL88 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.73■■□□□ 1.55
SHISA7A6NL88 BX664725.1-201ENST00000438252 379 ntBASIC24.73■■□□□ 1.55
SHISA7A6NL88 AC022616.5-201ENST00000518796 181 ntBASIC24.73■■□□□ 1.55
SHISA7A6NL88 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SHISA7A6NL88 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
SHISA7A6NL88 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.72■■□□□ 1.55
SHISA7A6NL88 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SHISA7A6NL88 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.72■■□□□ 1.55
SHISA7A6NL88 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SHISA7A6NL88 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
SHISA7A6NL88 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
SHISA7A6NL88 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SHISA7A6NL88 MIR638-201ENST00000385237 100 ntBASIC24.71■■□□□ 1.55
SHISA7A6NL88 AC137630.3-201ENST00000607245 391 ntBASIC24.71■■□□□ 1.55
SHISA7A6NL88 AL449106.1-201ENST00000608517 1980 ntBASIC24.71■■□□□ 1.55
SHISA7A6NL88 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
SHISA7A6NL88 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SHISA7A6NL88 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.7■■□□□ 1.54
SHISA7A6NL88 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.7■■□□□ 1.54
SHISA7A6NL88 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.7■■□□□ 1.54
SHISA7A6NL88 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
SHISA7A6NL88 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SHISA7A6NL88 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SHISA7A6NL88 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.69■■□□□ 1.54
SHISA7A6NL88 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SHISA7A6NL88 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SHISA7A6NL88 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.68■■□□□ 1.54
SHISA7A6NL88 KRT16P3-201ENST00000439127 1283 ntBASIC24.68■■□□□ 1.54
SHISA7A6NL88 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
SHISA7A6NL88 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.68■■□□□ 1.54
SHISA7A6NL88 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.68■■□□□ 1.54
SHISA7A6NL88 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHISA7A6NL88 AC021242.3-201ENST00000607598 1377 ntBASIC24.67■■□□□ 1.54
SHISA7A6NL88 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SHISA7A6NL88 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SHISA7A6NL88 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SHISA7A6NL88 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.67■■□□□ 1.54
SHISA7A6NL88 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms