Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-4A0A0B4J246 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-4A0A0B4J246 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-4A0A0B4J246 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-4A0A0B4J246 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-4A0A0B4J246 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-4A0A0B4J246 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-4A0A0B4J246 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV8-4A0A0B4J246 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-4A0A0B4J246 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-4A0A0B4J246 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-4A0A0B4J246 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV8-4A0A0B4J246 ABHD17AP4-201ENST00000411545 909 ntBASIC16.71■□□□□ 0.27
TRAV8-4A0A0B4J246 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV8-4A0A0B4J246 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV8-4A0A0B4J246 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-4A0A0B4J246 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV8-4A0A0B4J246 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-4A0A0B4J246 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV8-4A0A0B4J246 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TRAV8-4A0A0B4J246 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 AC148477.6-201ENST00000623746 465 ntBASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-4A0A0B4J246 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV8-4A0A0B4J246 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-4A0A0B4J246 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-4A0A0B4J246 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TRAV8-4A0A0B4J246 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV8-4A0A0B4J246 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV8-4A0A0B4J246 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-4A0A0B4J246 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-4A0A0B4J246 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV8-4A0A0B4J246 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-4A0A0B4J246 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-4A0A0B4J246 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-4A0A0B4J246 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV8-4A0A0B4J246 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-4A0A0B4J246 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-4A0A0B4J246 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-4A0A0B4J246 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-4A0A0B4J246 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRAV8-4A0A0B4J246 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-4A0A0B4J246 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.67■□□□□ 0.26
TRAV8-4A0A0B4J246 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRAV8-4A0A0B4J246 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-4A0A0B4J246 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-4A0A0B4J246 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-4A0A0B4J246 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRAV8-4A0A0B4J246 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV8-4A0A0B4J246 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-4A0A0B4J246 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-4A0A0B4J246 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-4A0A0B4J246 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-4A0A0B4J246 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TRAV8-4A0A0B4J246 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-4A0A0B4J246 AC020928.2-201ENST00000588717 2197 ntBASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 AP004609.3-201ENST00000610705 1884 ntBASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 AC142472.1-201ENST00000612013 1741 ntBASIC16.65■□□□□ 0.26
TRAV8-4A0A0B4J246 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 LINC00543-201ENST00000567234 1845 ntBASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 MIR219A2-201ENST00000608502 1504 ntBASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV8-4A0A0B4J246 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms