Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-2A0A0B4J237 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRAV8-2A0A0B4J237 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-2A0A0B4J237 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV8-2A0A0B4J237 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV8-2A0A0B4J237 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV8-2A0A0B4J237 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV8-2A0A0B4J237 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV8-2A0A0B4J237 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRAV8-2A0A0B4J237 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV8-2A0A0B4J237 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV8-2A0A0B4J237 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV8-2A0A0B4J237 AC016575.1-201ENST00000607026 382 ntBASIC18.29■□□□□ 0.52
TRAV8-2A0A0B4J237 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV8-2A0A0B4J237 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.28■□□□□ 0.52
TRAV8-2A0A0B4J237 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-2A0A0B4J237 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-2A0A0B4J237 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRAV8-2A0A0B4J237 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-2A0A0B4J237 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAV8-2A0A0B4J237 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-2A0A0B4J237 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-2A0A0B4J237 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRAV8-2A0A0B4J237 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-2A0A0B4J237 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-2A0A0B4J237 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-2A0A0B4J237 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-2A0A0B4J237 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TRAV8-2A0A0B4J237 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
TRAV8-2A0A0B4J237 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-2A0A0B4J237 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-2A0A0B4J237 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV8-2A0A0B4J237 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV8-2A0A0B4J237 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRAV8-2A0A0B4J237 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-2A0A0B4J237 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRAV8-2A0A0B4J237 AC096887.2-201ENST00000623443 1957 ntBASIC18.26■□□□□ 0.51
TRAV8-2A0A0B4J237 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-2A0A0B4J237 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 AC126177.7-201ENST00000547904 679 ntBASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRAV8-2A0A0B4J237 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-2A0A0B4J237 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAV8-2A0A0B4J237 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TRAV8-2A0A0B4J237 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-2A0A0B4J237 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-2A0A0B4J237 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-2A0A0B4J237 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-2A0A0B4J237 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-2A0A0B4J237 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-2A0A0B4J237 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-2A0A0B4J237 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-2A0A0B4J237 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-2A0A0B4J237 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV8-2A0A0B4J237 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-2A0A0B4J237 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TRAV8-2A0A0B4J237 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-2A0A0B4J237 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-2A0A0B4J237 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-2A0A0B4J237 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-2A0A0B4J237 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-2A0A0B4J237 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-2A0A0B4J237 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV8-2A0A0B4J237 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-2A0A0B4J237 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV8-2A0A0B4J237 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV8-2A0A0B4J237 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-2A0A0B4J237 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV8-2A0A0B4J237 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRAV8-2A0A0B4J237 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV8-2A0A0B4J237 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV8-2A0A0B4J237 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRAV8-2A0A0B4J237 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-2A0A0B4J237 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-2A0A0B4J237 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV8-2A0A0B4J237 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-2A0A0B4J237 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRAV8-2A0A0B4J237 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV8-2A0A0B4J237 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-2A0A0B4J237 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV8-2A0A0B4J237 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV8-2A0A0B4J237 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV8-2A0A0B4J237 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV8-2A0A0B4J237 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-2A0A0B4J237 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-2A0A0B4J237 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-2A0A0B4J237 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV8-2A0A0B4J237 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-2A0A0B4J237 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms