Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CSNK1G3Q9Y6M4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CSNK1G3Q9Y6M4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.92■■□□□ 1.42
CSNK1G3Q9Y6M4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CSNK1G3Q9Y6M4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CSNK1G3Q9Y6M4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CSNK1G3Q9Y6M4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CSNK1G3Q9Y6M4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSNK1G3Q9Y6M4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.91■■□□□ 1.42
CSNK1G3Q9Y6M4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.91■■□□□ 1.42
CSNK1G3Q9Y6M4 AC103834.1-201ENST00000520383 144 ntBASIC23.91■■□□□ 1.42
CSNK1G3Q9Y6M4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CSNK1G3Q9Y6M4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.9■■□□□ 1.42
CSNK1G3Q9Y6M4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.9■■□□□ 1.42
CSNK1G3Q9Y6M4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSNK1G3Q9Y6M4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSNK1G3Q9Y6M4 MIR4508-201ENST00000584178 70 ntBASIC23.9■■□□□ 1.42
CSNK1G3Q9Y6M4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CSNK1G3Q9Y6M4 PVT1_1.1-201ENST00000615125 194 ntBASIC23.9■■□□□ 1.42
CSNK1G3Q9Y6M4 KRT8P33-201ENST00000508125 1423 ntBASIC23.9■■□□□ 1.42
CSNK1G3Q9Y6M4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.9■■□□□ 1.42
CSNK1G3Q9Y6M4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.9■■□□□ 1.42
CSNK1G3Q9Y6M4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.89■■□□□ 1.42
CSNK1G3Q9Y6M4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CSNK1G3Q9Y6M4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
CSNK1G3Q9Y6M4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CSNK1G3Q9Y6M4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CSNK1G3Q9Y6M4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.89■■□□□ 1.41
CSNK1G3Q9Y6M4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CSNK1G3Q9Y6M4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CSNK1G3Q9Y6M4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CSNK1G3Q9Y6M4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CSNK1G3Q9Y6M4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.88■■□□□ 1.41
CSNK1G3Q9Y6M4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CSNK1G3Q9Y6M4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
CSNK1G3Q9Y6M4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CSNK1G3Q9Y6M4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CSNK1G3Q9Y6M4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.87■■□□□ 1.41
CSNK1G3Q9Y6M4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.87■■□□□ 1.41
CSNK1G3Q9Y6M4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.87■■□□□ 1.41
CSNK1G3Q9Y6M4 AC019171.1-201ENST00000601251 1056 ntBASIC23.87■■□□□ 1.41
CSNK1G3Q9Y6M4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSNK1G3Q9Y6M4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSNK1G3Q9Y6M4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CSNK1G3Q9Y6M4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CSNK1G3Q9Y6M4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CSNK1G3Q9Y6M4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.84■■□□□ 1.41
CSNK1G3Q9Y6M4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CSNK1G3Q9Y6M4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSNK1G3Q9Y6M4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CSNK1G3Q9Y6M4 AC087393.1-201ENST00000582896 145 ntBASIC23.83■■□□□ 1.41
CSNK1G3Q9Y6M4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CSNK1G3Q9Y6M4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CSNK1G3Q9Y6M4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
CSNK1G3Q9Y6M4 DRD5P2-201ENST00000421395 2012 ntBASIC23.83■■□□□ 1.4
CSNK1G3Q9Y6M4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CSNK1G3Q9Y6M4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CSNK1G3Q9Y6M4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CSNK1G3Q9Y6M4 AC009299.2-201ENST00000482477 511 ntBASIC23.82■■□□□ 1.4
CSNK1G3Q9Y6M4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.82■■□□□ 1.4
CSNK1G3Q9Y6M4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CSNK1G3Q9Y6M4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CSNK1G3Q9Y6M4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CSNK1G3Q9Y6M4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CSNK1G3Q9Y6M4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CSNK1G3Q9Y6M4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CSNK1G3Q9Y6M4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CSNK1G3Q9Y6M4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CSNK1G3Q9Y6M4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CSNK1G3Q9Y6M4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CSNK1G3Q9Y6M4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CSNK1G3Q9Y6M4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CSNK1G3Q9Y6M4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CSNK1G3Q9Y6M4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CSNK1G3Q9Y6M4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CSNK1G3Q9Y6M4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CSNK1G3Q9Y6M4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CSNK1G3Q9Y6M4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CSNK1G3Q9Y6M4 KRT18P10-201ENST00000388836 1287 ntBASIC23.79■■□□□ 1.4
CSNK1G3Q9Y6M4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CSNK1G3Q9Y6M4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CSNK1G3Q9Y6M4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CSNK1G3Q9Y6M4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CSNK1G3Q9Y6M4 RPS2P7-201ENST00000447334 885 ntBASIC23.78■■□□□ 1.4
CSNK1G3Q9Y6M4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CSNK1G3Q9Y6M4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CSNK1G3Q9Y6M4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.78■■□□□ 1.4
CSNK1G3Q9Y6M4 AL449106.1-201ENST00000608517 1980 ntBASIC23.78■■□□□ 1.4
CSNK1G3Q9Y6M4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.77■■□□□ 1.4
CSNK1G3Q9Y6M4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CSNK1G3Q9Y6M4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSNK1G3Q9Y6M4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSNK1G3Q9Y6M4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSNK1G3Q9Y6M4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CSNK1G3Q9Y6M4 LINC01003-201ENST00000564834 1764 ntBASIC23.76■■□□□ 1.39
CSNK1G3Q9Y6M4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
CSNK1G3Q9Y6M4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSNK1G3Q9Y6M4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CSNK1G3Q9Y6M4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSNK1G3Q9Y6M4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms