Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSM4Q9Y4Z0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.41■□□□□ 0.7
LSM4Q9Y4Z0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.41■□□□□ 0.7
LSM4Q9Y4Z0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM4Q9Y4Z0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LSM4Q9Y4Z0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.41■□□□□ 0.7
LSM4Q9Y4Z0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM4Q9Y4Z0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.41■□□□□ 0.7
LSM4Q9Y4Z0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM4Q9Y4Z0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.4■□□□□ 0.7
LSM4Q9Y4Z0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM4Q9Y4Z0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LSM4Q9Y4Z0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LSM4Q9Y4Z0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.4■□□□□ 0.7
LSM4Q9Y4Z0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LSM4Q9Y4Z0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM4Q9Y4Z0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSM4Q9Y4Z0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSM4Q9Y4Z0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSM4Q9Y4Z0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
LSM4Q9Y4Z0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSM4Q9Y4Z0 RARRES2P2-201ENST00000394842 485 ntBASIC19.39■□□□□ 0.69
LSM4Q9Y4Z0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.39■□□□□ 0.69
LSM4Q9Y4Z0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.39■□□□□ 0.69
LSM4Q9Y4Z0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.39■□□□□ 0.69
LSM4Q9Y4Z0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM4Q9Y4Z0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.39■□□□□ 0.69
LSM4Q9Y4Z0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSM4Q9Y4Z0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM4Q9Y4Z0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM4Q9Y4Z0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSM4Q9Y4Z0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSM4Q9Y4Z0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM4Q9Y4Z0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM4Q9Y4Z0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.37■□□□□ 0.69
LSM4Q9Y4Z0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM4Q9Y4Z0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
LSM4Q9Y4Z0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM4Q9Y4Z0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSM4Q9Y4Z0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LSM4Q9Y4Z0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.36■□□□□ 0.69
LSM4Q9Y4Z0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM4Q9Y4Z0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM4Q9Y4Z0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM4Q9Y4Z0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM4Q9Y4Z0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSM4Q9Y4Z0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM4Q9Y4Z0 WHAMMP3-201ENST00000611636 1609 ntBASIC19.36■□□□□ 0.69
LSM4Q9Y4Z0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSM4Q9Y4Z0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.35■□□□□ 0.69
LSM4Q9Y4Z0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM4Q9Y4Z0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSM4Q9Y4Z0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSM4Q9Y4Z0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSM4Q9Y4Z0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSM4Q9Y4Z0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
LSM4Q9Y4Z0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSM4Q9Y4Z0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSM4Q9Y4Z0 GPX1-201ENST00000419349 1106 ntBASIC19.34■□□□□ 0.69
LSM4Q9Y4Z0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.34■□□□□ 0.69
LSM4Q9Y4Z0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.34■□□□□ 0.69
LSM4Q9Y4Z0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSM4Q9Y4Z0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSM4Q9Y4Z0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LSM4Q9Y4Z0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LSM4Q9Y4Z0 ABHD17AP5-201ENST00000580133 923 ntBASIC19.33■□□□□ 0.68
LSM4Q9Y4Z0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.33■□□□□ 0.68
LSM4Q9Y4Z0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LSM4Q9Y4Z0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM4Q9Y4Z0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM4Q9Y4Z0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LSM4Q9Y4Z0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.32■□□□□ 0.68
LSM4Q9Y4Z0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.32■□□□□ 0.68
LSM4Q9Y4Z0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM4Q9Y4Z0 ERN1-208ENST00000606895 2068 ntBASIC19.32■□□□□ 0.68
LSM4Q9Y4Z0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM4Q9Y4Z0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM4Q9Y4Z0 AC110285.7-201ENST00000624417 1536 ntBASIC19.31■□□□□ 0.68
LSM4Q9Y4Z0 RNF126P1-201ENST00000567452 1320 ntBASIC19.31■□□□□ 0.68
LSM4Q9Y4Z0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
LSM4Q9Y4Z0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LSM4Q9Y4Z0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM4Q9Y4Z0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSM4Q9Y4Z0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LSM4Q9Y4Z0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
LSM4Q9Y4Z0 AC010501.1-201ENST00000606270 1962 ntBASIC19.3■□□□□ 0.68
LSM4Q9Y4Z0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LSM4Q9Y4Z0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.3■□□□□ 0.68
LSM4Q9Y4Z0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM4Q9Y4Z0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM4Q9Y4Z0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM4Q9Y4Z0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LSM4Q9Y4Z0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM4Q9Y4Z0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LSM4Q9Y4Z0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM4Q9Y4Z0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM4Q9Y4Z0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM4Q9Y4Z0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LSM4Q9Y4Z0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM4Q9Y4Z0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms