Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 RP9P-202ENST00000450133 1212 ntBASIC28.05■■■□□ 2.08
PCDHA6Q9UN73 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
PCDHA6Q9UN73 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.04■■■□□ 2.08
PCDHA6Q9UN73 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PCDHA6Q9UN73 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PCDHA6Q9UN73 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PCDHA6Q9UN73 MIR3960-201ENST00000583311 91 ntBASIC28.04■■■□□ 2.08
PCDHA6Q9UN73 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
PCDHA6Q9UN73 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHA6Q9UN73 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.03■■■□□ 2.08
PCDHA6Q9UN73 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.03■■■□□ 2.08
PCDHA6Q9UN73 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHA6Q9UN73 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
PCDHA6Q9UN73 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHA6Q9UN73 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.02■■■□□ 2.08
PCDHA6Q9UN73 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
PCDHA6Q9UN73 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.02■■■□□ 2.08
PCDHA6Q9UN73 AC026202.3-201ENST00000600805 1127 ntBASIC28.02■■■□□ 2.08
PCDHA6Q9UN73 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
PCDHA6Q9UN73 AC009831.1-201ENST00000580420 1582 ntBASIC28.02■■■□□ 2.08
PCDHA6Q9UN73 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHA6Q9UN73 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHA6Q9UN73 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHA6Q9UN73 AC093536.1-201ENST00000569153 554 ntBASIC28.01■■■□□ 2.07
PCDHA6Q9UN73 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHA6Q9UN73 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC28.01■■■□□ 2.07
PCDHA6Q9UN73 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHA6Q9UN73 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28■■■□□ 2.07
PCDHA6Q9UN73 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28■■■□□ 2.07
PCDHA6Q9UN73 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28■■■□□ 2.07
PCDHA6Q9UN73 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
PCDHA6Q9UN73 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28■■■□□ 2.07
PCDHA6Q9UN73 AC133552.2-201ENST00000619106 1032 ntBASIC28■■■□□ 2.07
PCDHA6Q9UN73 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHA6Q9UN73 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHA6Q9UN73 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHA6Q9UN73 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHA6Q9UN73 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PCDHA6Q9UN73 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.98■■■□□ 2.07
PCDHA6Q9UN73 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.98■■■□□ 2.07
PCDHA6Q9UN73 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
PCDHA6Q9UN73 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PCDHA6Q9UN73 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.98■■■□□ 2.07
PCDHA6Q9UN73 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHA6Q9UN73 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHA6Q9UN73 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHA6Q9UN73 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHA6Q9UN73 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
PCDHA6Q9UN73 KRT18P60-201ENST00000312876 1297 ntBASIC27.96■■■□□ 2.07
PCDHA6Q9UN73 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHA6Q9UN73 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.96■■■□□ 2.07
PCDHA6Q9UN73 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.96■■■□□ 2.07
PCDHA6Q9UN73 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.95■■■□□ 2.07
PCDHA6Q9UN73 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.95■■■□□ 2.06
PCDHA6Q9UN73 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
PCDHA6Q9UN73 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
PCDHA6Q9UN73 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.95■■■□□ 2.06
PCDHA6Q9UN73 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.94■■■□□ 2.06
PCDHA6Q9UN73 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PCDHA6Q9UN73 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
PCDHA6Q9UN73 AL592293.1-201ENST00000502889 1188 ntBASIC27.94■■■□□ 2.06
PCDHA6Q9UN73 RAP2CP1-202ENST00000605179 643 ntBASIC27.94■■■□□ 2.06
PCDHA6Q9UN73 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.94■■■□□ 2.06
PCDHA6Q9UN73 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
PCDHA6Q9UN73 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.94■■■□□ 2.06
PCDHA6Q9UN73 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.94■■■□□ 2.06
PCDHA6Q9UN73 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.94■■■□□ 2.06
PCDHA6Q9UN73 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PCDHA6Q9UN73 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PCDHA6Q9UN73 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PCDHA6Q9UN73 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.93■■■□□ 2.06
PCDHA6Q9UN73 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
PCDHA6Q9UN73 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.92■■■□□ 2.06
PCDHA6Q9UN73 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PCDHA6Q9UN73 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
PCDHA6Q9UN73 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
PCDHA6Q9UN73 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHA6Q9UN73 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHA6Q9UN73 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHA6Q9UN73 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.91■■■□□ 2.06
PCDHA6Q9UN73 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.91■■■□□ 2.06
PCDHA6Q9UN73 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHA6Q9UN73 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHA6Q9UN73 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.9■■■□□ 2.06
PCDHA6Q9UN73 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
PCDHA6Q9UN73 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.89■■■□□ 2.06
PCDHA6Q9UN73 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PCDHA6Q9UN73 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.89■■■□□ 2.05
PCDHA6Q9UN73 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
PCDHA6Q9UN73 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
PCDHA6Q9UN73 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.88■■■□□ 2.05
PCDHA6Q9UN73 AC012354.3-201ENST00000623734 483 ntBASIC27.88■■■□□ 2.05
PCDHA6Q9UN73 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCDHA6Q9UN73 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
PCDHA6Q9UN73 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCDHA6Q9UN73 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PCDHA6Q9UN73 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
PCDHA6Q9UN73 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.86■■■□□ 2.05
PCDHA6Q9UN73 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHA6Q9UN73 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms