Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
PCDHGC3Q9UN70 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.87■■□□□ 1.73
PCDHGC3Q9UN70 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGC3Q9UN70 GPX1-201ENST00000419349 1106 ntBASIC25.87■■□□□ 1.73
PCDHGC3Q9UN70 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
PCDHGC3Q9UN70 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHGC3Q9UN70 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHGC3Q9UN70 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.86■■□□□ 1.73
PCDHGC3Q9UN70 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHGC3Q9UN70 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHGC3Q9UN70 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHGC3Q9UN70 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PCDHGC3Q9UN70 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGC3Q9UN70 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
PCDHGC3Q9UN70 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.85■■□□□ 1.73
PCDHGC3Q9UN70 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDHGC3Q9UN70 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGC3Q9UN70 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDHGC3Q9UN70 AC145676.1-201ENST00000514988 2004 ntBASIC25.84■■□□□ 1.73
PCDHGC3Q9UN70 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGC3Q9UN70 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDHGC3Q9UN70 SMPD5-203ENST00000639008 1464 ntBASIC25.84■■□□□ 1.73
PCDHGC3Q9UN70 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGC3Q9UN70 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.83■■□□□ 1.73
PCDHGC3Q9UN70 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGC3Q9UN70 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
PCDHGC3Q9UN70 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PCDHGC3Q9UN70 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
PCDHGC3Q9UN70 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.82■■□□□ 1.72
PCDHGC3Q9UN70 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.82■■□□□ 1.72
PCDHGC3Q9UN70 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHGC3Q9UN70 DUSP8P4-201ENST00000399538 1761 ntBASIC25.82■■□□□ 1.72
PCDHGC3Q9UN70 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.81■■□□□ 1.72
PCDHGC3Q9UN70 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.81■■□□□ 1.72
PCDHGC3Q9UN70 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGC3Q9UN70 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHGC3Q9UN70 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PCDHGC3Q9UN70 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.8■■□□□ 1.72
PCDHGC3Q9UN70 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDHGC3Q9UN70 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGC3Q9UN70 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGC3Q9UN70 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.79■■□□□ 1.72
PCDHGC3Q9UN70 MIR3960-201ENST00000583311 91 ntBASIC25.79■■□□□ 1.72
PCDHGC3Q9UN70 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.79■■□□□ 1.72
PCDHGC3Q9UN70 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGC3Q9UN70 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDHGC3Q9UN70 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGC3Q9UN70 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGC3Q9UN70 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGC3Q9UN70 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHGC3Q9UN70 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHGC3Q9UN70 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHGC3Q9UN70 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.76■■□□□ 1.71
PCDHGC3Q9UN70 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDHGC3Q9UN70 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.76■■□□□ 1.71
PCDHGC3Q9UN70 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
PCDHGC3Q9UN70 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHGC3Q9UN70 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.76■■□□□ 1.71
PCDHGC3Q9UN70 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHGC3Q9UN70 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDHGC3Q9UN70 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGC3Q9UN70 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGC3Q9UN70 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGC3Q9UN70 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHGC3Q9UN70 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGC3Q9UN70 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGC3Q9UN70 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDHGC3Q9UN70 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGC3Q9UN70 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGC3Q9UN70 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGC3Q9UN70 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGC3Q9UN70 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGC3Q9UN70 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.74■■□□□ 1.71
PCDHGC3Q9UN70 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGC3Q9UN70 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGC3Q9UN70 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
PCDHGC3Q9UN70 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGC3Q9UN70 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGC3Q9UN70 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDHGC3Q9UN70 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGC3Q9UN70 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGC3Q9UN70 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGC3Q9UN70 RNF126P1-201ENST00000567452 1320 ntBASIC25.72■■□□□ 1.71
PCDHGC3Q9UN70 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
PCDHGC3Q9UN70 ERN1-208ENST00000606895 2068 ntBASIC25.72■■□□□ 1.71
PCDHGC3Q9UN70 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGC3Q9UN70 AC007029.1-201ENST00000604183 313 ntBASIC25.72■■□□□ 1.71
PCDHGC3Q9UN70 AC010501.1-201ENST00000606270 1962 ntBASIC25.72■■□□□ 1.71
PCDHGC3Q9UN70 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGC3Q9UN70 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGC3Q9UN70 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDHGC3Q9UN70 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGC3Q9UN70 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDHGC3Q9UN70 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.71■■□□□ 1.71
PCDHGC3Q9UN70 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.71■■□□□ 1.71
PCDHGC3Q9UN70 RP9P-202ENST00000450133 1212 ntBASIC25.71■■□□□ 1.71
PCDHGC3Q9UN70 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.71■■□□□ 1.71
PCDHGC3Q9UN70 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGC3Q9UN70 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDHGC3Q9UN70 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.7■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms