Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE2Q96FN4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE2Q96FN4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE2Q96FN4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.94■□□□□ 0.94
CPNE2Q96FN4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE2Q96FN4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE2Q96FN4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE2Q96FN4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE2Q96FN4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE2Q96FN4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.92■□□□□ 0.94
CPNE2Q96FN4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CPNE2Q96FN4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE2Q96FN4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE2Q96FN4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.92■□□□□ 0.94
CPNE2Q96FN4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.92■□□□□ 0.94
CPNE2Q96FN4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE2Q96FN4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE2Q96FN4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CPNE2Q96FN4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE2Q96FN4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE2Q96FN4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE2Q96FN4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE2Q96FN4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE2Q96FN4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CPNE2Q96FN4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CPNE2Q96FN4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.91■□□□□ 0.94
CPNE2Q96FN4 AC020928.2-201ENST00000588717 2197 ntBASIC20.91■□□□□ 0.94
CPNE2Q96FN4 AC010501.1-201ENST00000606270 1962 ntBASIC20.91■□□□□ 0.94
CPNE2Q96FN4 MIR219A2-201ENST00000608502 1504 ntBASIC20.91■□□□□ 0.94
CPNE2Q96FN4 DUX4L11-201ENST00000611504 1267 ntBASIC20.91■□□□□ 0.94
CPNE2Q96FN4 DUX4L12-201ENST00000614593 1267 ntBASIC20.91■□□□□ 0.94
CPNE2Q96FN4 DUX4L14-201ENST00000621227 1267 ntBASIC20.91■□□□□ 0.94
CPNE2Q96FN4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE2Q96FN4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE2Q96FN4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CPNE2Q96FN4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE2Q96FN4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE2Q96FN4 RPS2P35-201ENST00000443417 897 ntBASIC20.9■□□□□ 0.94
CPNE2Q96FN4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CPNE2Q96FN4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CPNE2Q96FN4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE2Q96FN4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE2Q96FN4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE2Q96FN4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE2Q96FN4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.89■□□□□ 0.93
CPNE2Q96FN4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE2Q96FN4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.89■□□□□ 0.93
CPNE2Q96FN4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE2Q96FN4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.88■□□□□ 0.93
CPNE2Q96FN4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE2Q96FN4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.87■□□□□ 0.93
CPNE2Q96FN4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CPNE2Q96FN4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE2Q96FN4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE2Q96FN4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CPNE2Q96FN4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE2Q96FN4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE2Q96FN4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CPNE2Q96FN4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE2Q96FN4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE2Q96FN4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE2Q96FN4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 AC126177.7-201ENST00000547904 679 ntBASIC20.85■□□□□ 0.93
CPNE2Q96FN4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE2Q96FN4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.84■□□□□ 0.93
CPNE2Q96FN4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CPNE2Q96FN4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE2Q96FN4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE2Q96FN4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE2Q96FN4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.83■□□□□ 0.93
CPNE2Q96FN4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE2Q96FN4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.83■□□□□ 0.93
CPNE2Q96FN4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CPNE2Q96FN4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.82■□□□□ 0.92
CPNE2Q96FN4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE2Q96FN4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE2Q96FN4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE2Q96FN4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.82■□□□□ 0.92
CPNE2Q96FN4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms