Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
SNED1Q8TER0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
SNED1Q8TER0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
SNED1Q8TER0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
SNED1Q8TER0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SNED1Q8TER0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SNED1Q8TER0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.22■■■□□ 2.43
SNED1Q8TER0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
SNED1Q8TER0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SNED1Q8TER0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SNED1Q8TER0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SNED1Q8TER0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SNED1Q8TER0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.22■■■□□ 2.43
SNED1Q8TER0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.22■■■□□ 2.43
SNED1Q8TER0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
SNED1Q8TER0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.21■■■□□ 2.43
SNED1Q8TER0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.21■■■□□ 2.43
SNED1Q8TER0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.21■■■□□ 2.43
SNED1Q8TER0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
SNED1Q8TER0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
SNED1Q8TER0 Z92544.1-202ENST00000571933 1220 ntBASIC30.2■■■□□ 2.42
SNED1Q8TER0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
SNED1Q8TER0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
SNED1Q8TER0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNED1Q8TER0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SNED1Q8TER0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.19■■■□□ 2.42
SNED1Q8TER0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNED1Q8TER0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SNED1Q8TER0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.18■■■□□ 2.42
SNED1Q8TER0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.18■■■□□ 2.42
SNED1Q8TER0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
SNED1Q8TER0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.17■■■□□ 2.42
SNED1Q8TER0 WHAMMP3-201ENST00000611636 1609 ntBASIC30.17■■■□□ 2.42
SNED1Q8TER0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SNED1Q8TER0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SNED1Q8TER0 LONRF2P2-201ENST00000439212 571 ntBASIC30.17■■■□□ 2.42
SNED1Q8TER0 AC239859.2-201ENST00000444165 318 ntBASIC30.17■■■□□ 2.42
SNED1Q8TER0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.17■■■□□ 2.42
SNED1Q8TER0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SNED1Q8TER0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.17■■■□□ 2.42
SNED1Q8TER0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SNED1Q8TER0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SNED1Q8TER0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SNED1Q8TER0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
SNED1Q8TER0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.16■■■□□ 2.42
SNED1Q8TER0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SNED1Q8TER0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SNED1Q8TER0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
SNED1Q8TER0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SNED1Q8TER0 RPS2P7-201ENST00000447334 885 ntBASIC30.14■■■□□ 2.42
SNED1Q8TER0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNED1Q8TER0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SNED1Q8TER0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNED1Q8TER0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNED1Q8TER0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.14■■■□□ 2.41
SNED1Q8TER0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
SNED1Q8TER0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SNED1Q8TER0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.13■■■□□ 2.41
SNED1Q8TER0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SNED1Q8TER0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.13■■■□□ 2.41
SNED1Q8TER0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNED1Q8TER0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.12■■■□□ 2.41
SNED1Q8TER0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
SNED1Q8TER0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SNED1Q8TER0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
SNED1Q8TER0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SNED1Q8TER0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
SNED1Q8TER0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.11■■■□□ 2.41
SNED1Q8TER0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.11■■■□□ 2.41
SNED1Q8TER0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SNED1Q8TER0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SNED1Q8TER0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SNED1Q8TER0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
SNED1Q8TER0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
SNED1Q8TER0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.09■■■□□ 2.41
SNED1Q8TER0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.08■■■□□ 2.41
SNED1Q8TER0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SNED1Q8TER0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
SNED1Q8TER0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
SNED1Q8TER0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.07■■■□□ 2.4
SNED1Q8TER0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SNED1Q8TER0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.07■■■□□ 2.4
SNED1Q8TER0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SNED1Q8TER0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
SNED1Q8TER0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.06■■■□□ 2.4
SNED1Q8TER0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SNED1Q8TER0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.05■■■□□ 2.4
SNED1Q8TER0 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.05■■■□□ 2.4
SNED1Q8TER0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
SNED1Q8TER0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SNED1Q8TER0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
SNED1Q8TER0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.05■■■□□ 2.4
SNED1Q8TER0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.05■■■□□ 2.4
SNED1Q8TER0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SNED1Q8TER0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.04■■■□□ 2.4
SNED1Q8TER0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SNED1Q8TER0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SNED1Q8TER0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.04■■■□□ 2.4
SNED1Q8TER0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.04■■■□□ 2.4
SNED1Q8TER0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms