Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SIMC1Q8NDZ2 AC126177.7-201ENST00000547904 679 ntBASIC22.91■■□□□ 1.26
SIMC1Q8NDZ2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SIMC1Q8NDZ2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SIMC1Q8NDZ2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SIMC1Q8NDZ2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.9■■□□□ 1.26
SIMC1Q8NDZ2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SIMC1Q8NDZ2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SIMC1Q8NDZ2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SIMC1Q8NDZ2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SIMC1Q8NDZ2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SIMC1Q8NDZ2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.89■■□□□ 1.26
SIMC1Q8NDZ2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
SIMC1Q8NDZ2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
SIMC1Q8NDZ2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SIMC1Q8NDZ2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SIMC1Q8NDZ2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
SIMC1Q8NDZ2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.88■■□□□ 1.25
SIMC1Q8NDZ2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.88■■□□□ 1.25
SIMC1Q8NDZ2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SIMC1Q8NDZ2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SIMC1Q8NDZ2 GPX1-201ENST00000419349 1106 ntBASIC22.87■■□□□ 1.25
SIMC1Q8NDZ2 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.87■■□□□ 1.25
SIMC1Q8NDZ2 AC092296.2-201ENST00000589470 999 ntBASIC22.87■■□□□ 1.25
SIMC1Q8NDZ2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
SIMC1Q8NDZ2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SIMC1Q8NDZ2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.86■■□□□ 1.25
SIMC1Q8NDZ2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SIMC1Q8NDZ2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SIMC1Q8NDZ2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
SIMC1Q8NDZ2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SIMC1Q8NDZ2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
SIMC1Q8NDZ2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.85■■□□□ 1.25
SIMC1Q8NDZ2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SIMC1Q8NDZ2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SIMC1Q8NDZ2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.85■■□□□ 1.25
SIMC1Q8NDZ2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SIMC1Q8NDZ2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
SIMC1Q8NDZ2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SIMC1Q8NDZ2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SIMC1Q8NDZ2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SIMC1Q8NDZ2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
SIMC1Q8NDZ2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.84■■□□□ 1.25
SIMC1Q8NDZ2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.83■■□□□ 1.25
SIMC1Q8NDZ2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SIMC1Q8NDZ2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.83■■□□□ 1.24
SIMC1Q8NDZ2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.24
SIMC1Q8NDZ2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.82■■□□□ 1.24
SIMC1Q8NDZ2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SIMC1Q8NDZ2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SIMC1Q8NDZ2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.82■■□□□ 1.24
SIMC1Q8NDZ2 AC091060.1-201ENST00000623524 1766 ntBASIC22.81■■□□□ 1.24
SIMC1Q8NDZ2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SIMC1Q8NDZ2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SIMC1Q8NDZ2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SIMC1Q8NDZ2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SIMC1Q8NDZ2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SIMC1Q8NDZ2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SIMC1Q8NDZ2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.8■■□□□ 1.24
SIMC1Q8NDZ2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
SIMC1Q8NDZ2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
SIMC1Q8NDZ2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SIMC1Q8NDZ2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
SIMC1Q8NDZ2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.8■■□□□ 1.24
SIMC1Q8NDZ2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.79■■□□□ 1.24
SIMC1Q8NDZ2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SIMC1Q8NDZ2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.79■■□□□ 1.24
SIMC1Q8NDZ2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.79■■□□□ 1.24
SIMC1Q8NDZ2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
SIMC1Q8NDZ2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SIMC1Q8NDZ2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.78■■□□□ 1.24
SIMC1Q8NDZ2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SIMC1Q8NDZ2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
SIMC1Q8NDZ2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SIMC1Q8NDZ2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SIMC1Q8NDZ2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.77■■□□□ 1.24
SIMC1Q8NDZ2 AC025884.2-201ENST00000553429 711 ntBASIC22.77■■□□□ 1.24
SIMC1Q8NDZ2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.77■■□□□ 1.24
SIMC1Q8NDZ2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SIMC1Q8NDZ2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
SIMC1Q8NDZ2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SIMC1Q8NDZ2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.77■■□□□ 1.24
SIMC1Q8NDZ2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SIMC1Q8NDZ2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SIMC1Q8NDZ2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.76■■□□□ 1.23
SIMC1Q8NDZ2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
SIMC1Q8NDZ2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.76■■□□□ 1.23
SIMC1Q8NDZ2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SIMC1Q8NDZ2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SIMC1Q8NDZ2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.76■■□□□ 1.23
SIMC1Q8NDZ2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.76■■□□□ 1.23
SIMC1Q8NDZ2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
SIMC1Q8NDZ2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
SIMC1Q8NDZ2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.75■■□□□ 1.23
SIMC1Q8NDZ2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.75■■□□□ 1.23
SIMC1Q8NDZ2 ECEL1P2-201ENST00000461596 1295 ntBASIC22.75■■□□□ 1.23
SIMC1Q8NDZ2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.75■■□□□ 1.23
SIMC1Q8NDZ2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.74■■□□□ 1.23
SIMC1Q8NDZ2 SMPD5-203ENST00000639008 1464 ntBASIC22.74■■□□□ 1.23
SIMC1Q8NDZ2 ERN1-208ENST00000606895 2068 ntBASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms