Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC34.66■■■■□ 3.14
XRN1Q8IZH2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
XRN1Q8IZH2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
XRN1Q8IZH2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
XRN1Q8IZH2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
XRN1Q8IZH2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC34.65■■■■□ 3.14
XRN1Q8IZH2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC34.65■■■■□ 3.14
XRN1Q8IZH2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
XRN1Q8IZH2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
XRN1Q8IZH2 RPS2P7-201ENST00000447334 885 ntBASIC34.64■■■■□ 3.14
XRN1Q8IZH2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC34.64■■■■□ 3.14
XRN1Q8IZH2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC34.64■■■■□ 3.14
XRN1Q8IZH2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
XRN1Q8IZH2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC34.63■■■■□ 3.13
XRN1Q8IZH2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
XRN1Q8IZH2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC34.63■■■■□ 3.13
XRN1Q8IZH2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
XRN1Q8IZH2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC34.61■■■■□ 3.13
XRN1Q8IZH2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
XRN1Q8IZH2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
XRN1Q8IZH2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
XRN1Q8IZH2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
XRN1Q8IZH2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
XRN1Q8IZH2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC34.59■■■■□ 3.13
XRN1Q8IZH2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
XRN1Q8IZH2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
XRN1Q8IZH2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC34.59■■■■□ 3.13
XRN1Q8IZH2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
XRN1Q8IZH2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC34.59■■■■□ 3.13
XRN1Q8IZH2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
XRN1Q8IZH2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
XRN1Q8IZH2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC34.59■■■■□ 3.13
XRN1Q8IZH2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
XRN1Q8IZH2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC34.58■■■■□ 3.13
XRN1Q8IZH2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC34.58■■■■□ 3.13
XRN1Q8IZH2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
XRN1Q8IZH2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
XRN1Q8IZH2 UNC93B8-201ENST00000511903 705 ntBASIC34.58■■■■□ 3.13
XRN1Q8IZH2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC34.57■■■■□ 3.12
XRN1Q8IZH2 LONRF2P2-201ENST00000439212 571 ntBASIC34.57■■■■□ 3.12
XRN1Q8IZH2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC34.56■■■■□ 3.12
XRN1Q8IZH2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
XRN1Q8IZH2 MIR935-201ENST00000401179 91 ntBASIC34.56■■■■□ 3.12
XRN1Q8IZH2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC34.56■■■■□ 3.12
XRN1Q8IZH2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
XRN1Q8IZH2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC34.56■■■■□ 3.12
XRN1Q8IZH2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
XRN1Q8IZH2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC34.55■■■■□ 3.12
XRN1Q8IZH2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC34.55■■■■□ 3.12
XRN1Q8IZH2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC34.55■■■■□ 3.12
XRN1Q8IZH2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC34.54■■■■□ 3.12
XRN1Q8IZH2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
XRN1Q8IZH2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC34.53■■■■□ 3.12
XRN1Q8IZH2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
XRN1Q8IZH2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC34.53■■■■□ 3.12
XRN1Q8IZH2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC34.53■■■■□ 3.12
XRN1Q8IZH2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
XRN1Q8IZH2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
XRN1Q8IZH2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC34.52■■■■□ 3.12
XRN1Q8IZH2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
XRN1Q8IZH2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC34.52■■■■□ 3.12
XRN1Q8IZH2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC34.52■■■■□ 3.12
XRN1Q8IZH2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC34.52■■■■□ 3.12
XRN1Q8IZH2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC34.52■■■■□ 3.12
XRN1Q8IZH2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
XRN1Q8IZH2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
XRN1Q8IZH2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC34.51■■■■□ 3.12
XRN1Q8IZH2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
XRN1Q8IZH2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC34.51■■■■□ 3.11
XRN1Q8IZH2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
XRN1Q8IZH2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC34.51■■■■□ 3.11
XRN1Q8IZH2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
XRN1Q8IZH2 AC008406.3-201ENST00000620001 1374 ntBASIC34.5■■■■□ 3.11
XRN1Q8IZH2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
XRN1Q8IZH2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC34.5■■■■□ 3.11
XRN1Q8IZH2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC34.5■■■■□ 3.11
XRN1Q8IZH2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
XRN1Q8IZH2 KRT16P3-201ENST00000439127 1283 ntBASIC34.5■■■■□ 3.11
XRN1Q8IZH2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
XRN1Q8IZH2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC34.49■■■■□ 3.11
XRN1Q8IZH2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC34.49■■■■□ 3.11
XRN1Q8IZH2 MIR638-201ENST00000385237 100 ntBASIC34.49■■■■□ 3.11
XRN1Q8IZH2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC34.48■■■■□ 3.11
XRN1Q8IZH2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
XRN1Q8IZH2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
XRN1Q8IZH2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
XRN1Q8IZH2 BX664725.1-201ENST00000438252 379 ntBASIC34.48■■■■□ 3.11
XRN1Q8IZH2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC34.48■■■■□ 3.11
XRN1Q8IZH2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
XRN1Q8IZH2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
XRN1Q8IZH2 MIR4787-201ENST00000607364 84 ntBASIC34.47■■■■□ 3.11
XRN1Q8IZH2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
XRN1Q8IZH2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC34.47■■■■□ 3.11
XRN1Q8IZH2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC34.46■■■■□ 3.11
XRN1Q8IZH2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC34.46■■■■□ 3.11
XRN1Q8IZH2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC34.45■■■■□ 3.11
XRN1Q8IZH2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC34.45■■■■□ 3.11
XRN1Q8IZH2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
XRN1Q8IZH2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
XRN1Q8IZH2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms