Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SCUBE3Q8IX30 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SCUBE3Q8IX30 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.7■■□□□ 1.71
SCUBE3Q8IX30 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
SCUBE3Q8IX30 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCUBE3Q8IX30 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCUBE3Q8IX30 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCUBE3Q8IX30 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.7■■□□□ 1.7
SCUBE3Q8IX30 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
SCUBE3Q8IX30 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCUBE3Q8IX30 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.69■■□□□ 1.7
SCUBE3Q8IX30 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.69■■□□□ 1.7
SCUBE3Q8IX30 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.69■■□□□ 1.7
SCUBE3Q8IX30 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SCUBE3Q8IX30 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SCUBE3Q8IX30 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCUBE3Q8IX30 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCUBE3Q8IX30 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.69■■□□□ 1.7
SCUBE3Q8IX30 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SCUBE3Q8IX30 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCUBE3Q8IX30 AC007029.1-201ENST00000604183 313 ntBASIC25.68■■□□□ 1.7
SCUBE3Q8IX30 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SCUBE3Q8IX30 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SCUBE3Q8IX30 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
SCUBE3Q8IX30 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCUBE3Q8IX30 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
SCUBE3Q8IX30 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SCUBE3Q8IX30 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCUBE3Q8IX30 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCUBE3Q8IX30 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCUBE3Q8IX30 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SCUBE3Q8IX30 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.67■■□□□ 1.7
SCUBE3Q8IX30 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCUBE3Q8IX30 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCUBE3Q8IX30 MIR3960-201ENST00000583311 91 ntBASIC25.66■■□□□ 1.7
SCUBE3Q8IX30 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCUBE3Q8IX30 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.66■■□□□ 1.7
SCUBE3Q8IX30 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SCUBE3Q8IX30 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.64■■□□□ 1.7
SCUBE3Q8IX30 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SCUBE3Q8IX30 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCUBE3Q8IX30 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.63■■□□□ 1.69
SCUBE3Q8IX30 RP9P-202ENST00000450133 1212 ntBASIC25.63■■□□□ 1.69
SCUBE3Q8IX30 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SCUBE3Q8IX30 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
SCUBE3Q8IX30 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCUBE3Q8IX30 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCUBE3Q8IX30 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCUBE3Q8IX30 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCUBE3Q8IX30 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.63■■□□□ 1.69
SCUBE3Q8IX30 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SCUBE3Q8IX30 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SCUBE3Q8IX30 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCUBE3Q8IX30 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.61■■□□□ 1.69
SCUBE3Q8IX30 AC093536.1-201ENST00000569153 554 ntBASIC25.61■■□□□ 1.69
SCUBE3Q8IX30 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SCUBE3Q8IX30 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.6■■□□□ 1.69
SCUBE3Q8IX30 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCUBE3Q8IX30 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCUBE3Q8IX30 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCUBE3Q8IX30 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.59■■□□□ 1.69
SCUBE3Q8IX30 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SCUBE3Q8IX30 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.58■■□□□ 1.69
SCUBE3Q8IX30 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SCUBE3Q8IX30 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.58■■□□□ 1.69
SCUBE3Q8IX30 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SCUBE3Q8IX30 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SCUBE3Q8IX30 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.57■■□□□ 1.68
SCUBE3Q8IX30 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
SCUBE3Q8IX30 AC026202.3-201ENST00000600805 1127 ntBASIC25.57■■□□□ 1.68
SCUBE3Q8IX30 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.56■■□□□ 1.68
SCUBE3Q8IX30 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCUBE3Q8IX30 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCUBE3Q8IX30 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SCUBE3Q8IX30 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SCUBE3Q8IX30 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.56■■□□□ 1.68
SCUBE3Q8IX30 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCUBE3Q8IX30 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
SCUBE3Q8IX30 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCUBE3Q8IX30 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SCUBE3Q8IX30 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCUBE3Q8IX30 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SCUBE3Q8IX30 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SCUBE3Q8IX30 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SCUBE3Q8IX30 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCUBE3Q8IX30 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCUBE3Q8IX30 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCUBE3Q8IX30 AC009831.1-201ENST00000580420 1582 ntBASIC25.53■■□□□ 1.68
SCUBE3Q8IX30 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.53■■□□□ 1.68
SCUBE3Q8IX30 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SCUBE3Q8IX30 ABHD17AP5-201ENST00000580133 923 ntBASIC25.53■■□□□ 1.68
SCUBE3Q8IX30 AC133552.2-201ENST00000619106 1032 ntBASIC25.53■■□□□ 1.68
SCUBE3Q8IX30 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
SCUBE3Q8IX30 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SCUBE3Q8IX30 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.52■■□□□ 1.68
SCUBE3Q8IX30 RAP2CP1-202ENST00000605179 643 ntBASIC25.52■■□□□ 1.68
SCUBE3Q8IX30 U85056.1-201ENST00000616429 682 ntBASIC25.52■■□□□ 1.68
SCUBE3Q8IX30 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SCUBE3Q8IX30 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SCUBE3Q8IX30 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms