Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
CDC42BPAQ5VT25 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC37.69■■■■□ 3.62
CDC42BPAQ5VT25 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
CDC42BPAQ5VT25 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
CDC42BPAQ5VT25 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC37.69■■■■□ 3.62
CDC42BPAQ5VT25 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC37.69■■■■□ 3.62
CDC42BPAQ5VT25 AC087393.1-201ENST00000582896 145 ntBASIC37.68■■■■□ 3.62
CDC42BPAQ5VT25 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC37.67■■■■□ 3.62
CDC42BPAQ5VT25 AL031848.2-201ENST00000607670 837 ntBASIC37.67■■■■□ 3.62
CDC42BPAQ5VT25 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC37.67■■■■□ 3.62
CDC42BPAQ5VT25 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC37.67■■■■□ 3.62
CDC42BPAQ5VT25 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC37.66■■■■□ 3.62
CDC42BPAQ5VT25 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC37.66■■■■□ 3.62
CDC42BPAQ5VT25 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
CDC42BPAQ5VT25 AC019171.1-201ENST00000601251 1056 ntBASIC37.66■■■■□ 3.62
CDC42BPAQ5VT25 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC37.66■■■■□ 3.62
CDC42BPAQ5VT25 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC37.65■■■■□ 3.62
CDC42BPAQ5VT25 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
CDC42BPAQ5VT25 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC37.65■■■■□ 3.62
CDC42BPAQ5VT25 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
CDC42BPAQ5VT25 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC37.65■■■■□ 3.62
CDC42BPAQ5VT25 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC37.65■■■■□ 3.62
CDC42BPAQ5VT25 AC019069.1-201ENST00000610008 1333 ntBASIC37.65■■■■□ 3.62
CDC42BPAQ5VT25 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC37.64■■■■□ 3.62
CDC42BPAQ5VT25 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC37.64■■■■□ 3.62
CDC42BPAQ5VT25 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
CDC42BPAQ5VT25 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC37.63■■■■□ 3.61
CDC42BPAQ5VT25 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
CDC42BPAQ5VT25 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
CDC42BPAQ5VT25 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC37.62■■■■□ 3.61
CDC42BPAQ5VT25 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC37.62■■■■□ 3.61
CDC42BPAQ5VT25 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
CDC42BPAQ5VT25 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
CDC42BPAQ5VT25 THA1P-201ENST00000590384 1145 ntBASIC37.61■■■■□ 3.61
CDC42BPAQ5VT25 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC37.61■■■■□ 3.61
CDC42BPAQ5VT25 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC37.61■■■■□ 3.61
CDC42BPAQ5VT25 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
CDC42BPAQ5VT25 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC37.6■■■■□ 3.61
CDC42BPAQ5VT25 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
CDC42BPAQ5VT25 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC37.59■■■■□ 3.61
CDC42BPAQ5VT25 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC37.59■■■■□ 3.61
CDC42BPAQ5VT25 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC37.59■■■■□ 3.61
CDC42BPAQ5VT25 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC37.59■■■■□ 3.61
CDC42BPAQ5VT25 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
CDC42BPAQ5VT25 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC37.58■■■■□ 3.61
CDC42BPAQ5VT25 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC37.58■■■■□ 3.61
CDC42BPAQ5VT25 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC37.58■■■■□ 3.61
CDC42BPAQ5VT25 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC37.57■■■■□ 3.61
CDC42BPAQ5VT25 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
CDC42BPAQ5VT25 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC37.57■■■■□ 3.6
CDC42BPAQ5VT25 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC37.57■■■■□ 3.6
CDC42BPAQ5VT25 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
CDC42BPAQ5VT25 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC37.56■■■■□ 3.6
CDC42BPAQ5VT25 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
CDC42BPAQ5VT25 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC37.56■■■■□ 3.6
CDC42BPAQ5VT25 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
CDC42BPAQ5VT25 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC37.56■■■■□ 3.6
CDC42BPAQ5VT25 RPS2P7-201ENST00000447334 885 ntBASIC37.56■■■■□ 3.6
CDC42BPAQ5VT25 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC37.56■■■■□ 3.6
CDC42BPAQ5VT25 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
CDC42BPAQ5VT25 TK2-216ENST00000564917 1156 ntTSL 3 BASIC37.55■■■■□ 3.6
CDC42BPAQ5VT25 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC37.55■■■■□ 3.6
CDC42BPAQ5VT25 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
CDC42BPAQ5VT25 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC37.54■■■■□ 3.6
CDC42BPAQ5VT25 MTURN-203ENST00000409688 843 ntTSL 2 BASIC37.54■■■■□ 3.6
CDC42BPAQ5VT25 RNF146-205ENST00000477776 762 ntTSL 3 BASIC37.53■■■■□ 3.6
CDC42BPAQ5VT25 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC37.53■■■■□ 3.6
CDC42BPAQ5VT25 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
CDC42BPAQ5VT25 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
CDC42BPAQ5VT25 AL356441.2-201ENST00000443009 864 ntBASIC37.52■■■■□ 3.6
CDC42BPAQ5VT25 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC37.52■■■■□ 3.6
CDC42BPAQ5VT25 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC37.5■■■■□ 3.59
CDC42BPAQ5VT25 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
CDC42BPAQ5VT25 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
CDC42BPAQ5VT25 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC37.5■■■■□ 3.59
CDC42BPAQ5VT25 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC37.49■■■■□ 3.59
CDC42BPAQ5VT25 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC37.49■■■■□ 3.59
CDC42BPAQ5VT25 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
CDC42BPAQ5VT25 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC37.48■■■■□ 3.59
CDC42BPAQ5VT25 Z92544.1-202ENST00000571933 1220 ntBASIC37.48■■■■□ 3.59
CDC42BPAQ5VT25 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC37.48■■■■□ 3.59
CDC42BPAQ5VT25 AL449106.1-201ENST00000608517 1980 ntBASIC37.48■■■■□ 3.59
CDC42BPAQ5VT25 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC37.47■■■■□ 3.59
CDC42BPAQ5VT25 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
CDC42BPAQ5VT25 DRD5P2-201ENST00000421395 2012 ntBASIC37.47■■■■□ 3.59
CDC42BPAQ5VT25 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC37.47■■■■□ 3.59
CDC42BPAQ5VT25 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
CDC42BPAQ5VT25 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
CDC42BPAQ5VT25 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC37.47■■■■□ 3.59
CDC42BPAQ5VT25 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC37.47■■■■□ 3.59
CDC42BPAQ5VT25 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC37.46■■■■□ 3.59
CDC42BPAQ5VT25 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC37.46■■■■□ 3.59
CDC42BPAQ5VT25 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC37.45■■■■□ 3.59
CDC42BPAQ5VT25 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
CDC42BPAQ5VT25 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
CDC42BPAQ5VT25 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC37.45■■■■□ 3.59
CDC42BPAQ5VT25 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC37.44■■■■□ 3.58
CDC42BPAQ5VT25 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC37.44■■■■□ 3.58
CDC42BPAQ5VT25 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
CDC42BPAQ5VT25 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC37.43■■■■□ 3.58
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms