Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.78■■□□□ 1.08
CDKN2AP42771 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.78■■□□□ 1.08
CDKN2AP42771 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.78■■□□□ 1.08
CDKN2AP42771 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.78■■□□□ 1.08
CDKN2AP42771 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKN2AP42771 AC010501.1-201ENST00000606270 1962 ntBASIC21.78■■□□□ 1.08
CDKN2AP42771 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKN2AP42771 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKN2AP42771 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKN2AP42771 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CDKN2AP42771 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDKN2AP42771 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.77■■□□□ 1.08
CDKN2AP42771 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDKN2AP42771 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.77■■□□□ 1.08
CDKN2AP42771 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKN2AP42771 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN2AP42771 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.76■■□□□ 1.07
CDKN2AP42771 MIR3648-2-201ENST00000581792 180 ntBASIC21.76■■□□□ 1.07
CDKN2AP42771 MIR3648-1-201ENST00000615959 180 ntBASIC21.76■■□□□ 1.07
CDKN2AP42771 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.76■■□□□ 1.07
CDKN2AP42771 AL359504.2-201ENST00000605506 1601 ntBASIC21.76■■□□□ 1.07
CDKN2AP42771 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDKN2AP42771 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDKN2AP42771 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDKN2AP42771 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.75■■□□□ 1.07
CDKN2AP42771 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDKN2AP42771 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDKN2AP42771 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.74■■□□□ 1.07
CDKN2AP42771 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
CDKN2AP42771 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDKN2AP42771 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDKN2AP42771 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
CDKN2AP42771 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDKN2AP42771 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDKN2AP42771 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDKN2AP42771 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CDKN2AP42771 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN2AP42771 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN2AP42771 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDKN2AP42771 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.71■■□□□ 1.07
CDKN2AP42771 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.71■■□□□ 1.07
CDKN2AP42771 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CDKN2AP42771 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.71■■□□□ 1.07
CDKN2AP42771 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDKN2AP42771 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.7■■□□□ 1.06
CDKN2AP42771 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CDKN2AP42771 AC016575.1-201ENST00000607026 382 ntBASIC21.7■■□□□ 1.06
CDKN2AP42771 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDKN2AP42771 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDKN2AP42771 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDKN2AP42771 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.69■■□□□ 1.06
CDKN2AP42771 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDKN2AP42771 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDKN2AP42771 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDKN2AP42771 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDKN2AP42771 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDKN2AP42771 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDKN2AP42771 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDKN2AP42771 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.68■■□□□ 1.06
CDKN2AP42771 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKN2AP42771 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.68■■□□□ 1.06
CDKN2AP42771 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.68■■□□□ 1.06
CDKN2AP42771 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKN2AP42771 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDKN2AP42771 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CDKN2AP42771 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDKN2AP42771 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDKN2AP42771 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDKN2AP42771 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDKN2AP42771 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKN2AP42771 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDKN2AP42771 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKN2AP42771 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKN2AP42771 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CDKN2AP42771 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKN2AP42771 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKN2AP42771 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDKN2AP42771 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKN2AP42771 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKN2AP42771 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKN2AP42771 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDKN2AP42771 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDKN2AP42771 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.65■■□□□ 1.06
CDKN2AP42771 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.65■■□□□ 1.06
CDKN2AP42771 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDKN2AP42771 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKN2AP42771 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.64■■□□□ 1.06
CDKN2AP42771 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKN2AP42771 AC096887.2-201ENST00000623443 1957 ntBASIC21.64■■□□□ 1.05
CDKN2AP42771 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CDKN2AP42771 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CDKN2AP42771 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKN2AP42771 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDKN2AP42771 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKN2AP42771 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKN2AP42771 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.63■■□□□ 1.05
CDKN2AP42771 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CDKN2AP42771 AC126177.7-201ENST00000547904 679 ntBASIC21.62■■□□□ 1.05
CDKN2AP42771 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.62■■□□□ 1.05
CDKN2AP42771 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms