Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RXRBP28702 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC33.07■■■□□ 2.88
RXRBP28702 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RXRBP28702 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC33.07■■■□□ 2.88
RXRBP28702 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
RXRBP28702 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
RXRBP28702 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC33.05■■■□□ 2.88
RXRBP28702 PARL-206ENST00000435888 1098 ntTSL 5 BASIC33.05■■■□□ 2.88
RXRBP28702 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
RXRBP28702 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC33.04■■■□□ 2.88
RXRBP28702 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC33.04■■■□□ 2.88
RXRBP28702 AL117332.1-201ENST00000622628 974 ntBASIC33.04■■■□□ 2.88
RXRBP28702 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
RXRBP28702 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC33.03■■■□□ 2.88
RXRBP28702 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
RXRBP28702 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RXRBP28702 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
RXRBP28702 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC33.02■■■□□ 2.88
RXRBP28702 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC33.01■■■□□ 2.88
RXRBP28702 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC33.01■■■□□ 2.88
RXRBP28702 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
RXRBP28702 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC33.01■■■□□ 2.87
RXRBP28702 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC33.01■■■□□ 2.87
RXRBP28702 LGR4-203ENST00000480977 492 ntTSL 2 BASIC33.01■■■□□ 2.87
RXRBP28702 AC137630.3-201ENST00000607245 391 ntBASIC33.01■■■□□ 2.87
RXRBP28702 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
RXRBP28702 AC021242.3-201ENST00000607598 1377 ntBASIC33■■■□□ 2.87
RXRBP28702 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
RXRBP28702 MIR3621-201ENST00000580529 85 ntBASIC33■■■□□ 2.87
RXRBP28702 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC32.99■■■□□ 2.87
RXRBP28702 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
RXRBP28702 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC32.99■■■□□ 2.87
RXRBP28702 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC32.99■■■□□ 2.87
RXRBP28702 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
RXRBP28702 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RXRBP28702 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RXRBP28702 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
RXRBP28702 RPS2P7-201ENST00000447334 885 ntBASIC32.98■■■□□ 2.87
RXRBP28702 AC142381.2-201ENST00000566120 298 ntBASIC32.98■■■□□ 2.87
RXRBP28702 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC32.98■■■□□ 2.87
RXRBP28702 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.98■■■□□ 2.87
RXRBP28702 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RXRBP28702 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
RXRBP28702 MIR4466-201ENST00000606121 54 ntBASIC32.97■■■□□ 2.87
RXRBP28702 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
RXRBP28702 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
RXRBP28702 AC092028.1-203ENST00000608262 953 ntBASIC32.96■■■□□ 2.87
RXRBP28702 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC32.95■■■□□ 2.87
RXRBP28702 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
RXRBP28702 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC32.94■■■□□ 2.86
RXRBP28702 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC32.94■■■□□ 2.86
RXRBP28702 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
RXRBP28702 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC32.94■■■□□ 2.86
RXRBP28702 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
RXRBP28702 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
RXRBP28702 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
RXRBP28702 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
RXRBP28702 KRT18P24-201ENST00000344739 1156 ntBASIC32.92■■■□□ 2.86
RXRBP28702 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
RXRBP28702 AC022616.5-201ENST00000518796 181 ntBASIC32.92■■■□□ 2.86
RXRBP28702 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC32.92■■■□□ 2.86
RXRBP28702 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
RXRBP28702 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
RXRBP28702 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
RXRBP28702 TK2-202ENST00000417693 1046 ntTSL 2 BASIC32.91■■■□□ 2.86
RXRBP28702 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC32.91■■■□□ 2.86
RXRBP28702 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RXRBP28702 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RXRBP28702 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC32.9■■■□□ 2.86
RXRBP28702 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC32.9■■■□□ 2.86
RXRBP28702 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
RXRBP28702 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC32.9■■■□□ 2.86
RXRBP28702 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
RXRBP28702 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
RXRBP28702 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC32.89■■■□□ 2.86
RXRBP28702 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
RXRBP28702 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RXRBP28702 AC106739.1-201ENST00000617035 715 ntBASIC32.88■■■□□ 2.85
RXRBP28702 ANKRD20A6P-201ENST00000618763 204 ntBASIC32.88■■■□□ 2.85
RXRBP28702 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RXRBP28702 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
RXRBP28702 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
RXRBP28702 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.87■■■□□ 2.85
RXRBP28702 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
RXRBP28702 AL356740.2-201ENST00000601559 647 ntBASIC32.86■■■□□ 2.85
RXRBP28702 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC32.86■■■□□ 2.85
RXRBP28702 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC32.86■■■□□ 2.85
RXRBP28702 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RXRBP28702 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RXRBP28702 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC32.85■■■□□ 2.85
RXRBP28702 PBX2P1-201ENST00000493219 1291 ntBASIC32.85■■■□□ 2.85
RXRBP28702 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
RXRBP28702 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RXRBP28702 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RXRBP28702 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RXRBP28702 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC32.83■■■□□ 2.85
RXRBP28702 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
RXRBP28702 MIR6724-1-201ENST00000616420 92 ntBASIC32.81■■■□□ 2.84
RXRBP28702 MIR6724-2-201ENST00000616483 92 ntBASIC32.81■■■□□ 2.84
RXRBP28702 MIR6724-4-201ENST00000617390 92 ntBASIC32.81■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms