Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP6V0CP27449 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V0CP27449 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V0CP27449 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V0CP27449 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP6V0CP27449 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V0CP27449 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V0CP27449 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V0CP27449 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V0CP27449 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V0CP27449 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V0CP27449 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP6V0CP27449 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V0CP27449 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6V0CP27449 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0CP27449 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0CP27449 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0CP27449 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0CP27449 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0CP27449 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ATP6V0CP27449 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0CP27449 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0CP27449 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0CP27449 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0CP27449 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.42■□□□□ 0.7
ATP6V0CP27449 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP6V0CP27449 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0CP27449 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0CP27449 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP6V0CP27449 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0CP27449 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0CP27449 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0CP27449 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V0CP27449 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP6V0CP27449 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP6V0CP27449 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V0CP27449 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V0CP27449 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V0CP27449 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP6V0CP27449 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP6V0CP27449 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.39■□□□□ 0.7
ATP6V0CP27449 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP6V0CP27449 AC068473.5-201ENST00000616428 2072 ntBASIC19.39■□□□□ 0.69
ATP6V0CP27449 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V0CP27449 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V0CP27449 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V0CP27449 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V0CP27449 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP6V0CP27449 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP6V0CP27449 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP6V0CP27449 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP6V0CP27449 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP6V0CP27449 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.37■□□□□ 0.69
ATP6V0CP27449 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP6V0CP27449 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ATP6V0CP27449 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0CP27449 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0CP27449 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP6V0CP27449 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.36■□□□□ 0.69
ATP6V0CP27449 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0CP27449 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0CP27449 WHAMMP3-201ENST00000611636 1609 ntBASIC19.36■□□□□ 0.69
ATP6V0CP27449 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ATP6V0CP27449 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0CP27449 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0CP27449 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0CP27449 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0CP27449 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP6V0CP27449 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0CP27449 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
ATP6V0CP27449 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP6V0CP27449 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0CP27449 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0CP27449 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATP6V0CP27449 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0CP27449 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATP6V0CP27449 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP6V0CP27449 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.33■□□□□ 0.68
ATP6V0CP27449 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ATP6V0CP27449 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0CP27449 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0CP27449 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP6V0CP27449 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0CP27449 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP6V0CP27449 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0CP27449 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0CP27449 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP6V0CP27449 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0CP27449 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0CP27449 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0CP27449 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP6V0CP27449 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP6V0CP27449 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0CP27449 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0CP27449 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0CP27449 LINC01124-201ENST00000409786 2117 ntBASIC19.31■□□□□ 0.68
ATP6V0CP27449 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP6V0CP27449 AC079834.2-201ENST00000609776 1949 ntBASIC19.31■□□□□ 0.68
ATP6V0CP27449 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ATP6V0CP27449 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms