Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 U85056.1-201ENST00000616429 682 ntBASIC20.63■□□□□ 0.89
TNFRSF1AP19438 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1AP19438 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TNFRSF1AP19438 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TNFRSF1AP19438 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1AP19438 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1AP19438 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.62■□□□□ 0.89
TNFRSF1AP19438 AC009831.1-201ENST00000580420 1582 ntBASIC20.62■□□□□ 0.89
TNFRSF1AP19438 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1AP19438 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFRSF1AP19438 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.61■□□□□ 0.89
TNFRSF1AP19438 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF1AP19438 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF1AP19438 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TNFRSF1AP19438 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TNFRSF1AP19438 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.61■□□□□ 0.89
TNFRSF1AP19438 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFRSF1AP19438 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TNFRSF1AP19438 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFRSF1AP19438 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TNFRSF1AP19438 RAP2CP1-202ENST00000605179 643 ntBASIC20.6■□□□□ 0.89
TNFRSF1AP19438 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1AP19438 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1AP19438 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFRSF1AP19438 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFRSF1AP19438 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFRSF1AP19438 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFRSF1AP19438 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TNFRSF1AP19438 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.58■□□□□ 0.89
TNFRSF1AP19438 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNFRSF1AP19438 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNFRSF1AP19438 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNFRSF1AP19438 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNFRSF1AP19438 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFRSF1AP19438 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFRSF1AP19438 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
TNFRSF1AP19438 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNFRSF1AP19438 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNFRSF1AP19438 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF1AP19438 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF1AP19438 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF1AP19438 AL592293.1-201ENST00000502889 1188 ntBASIC20.56■□□□□ 0.88
TNFRSF1AP19438 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF1AP19438 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TNFRSF1AP19438 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF1AP19438 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF1AP19438 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.56■□□□□ 0.88
TNFRSF1AP19438 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF1AP19438 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TNFRSF1AP19438 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF1AP19438 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF1AP19438 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TNFRSF1AP19438 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1AP19438 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TNFRSF1AP19438 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1AP19438 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TNFRSF1AP19438 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TNFRSF1AP19438 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TNFRSF1AP19438 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TNFRSF1AP19438 AL121749.1-202ENST00000609313 2153 ntBASIC20.55■□□□□ 0.88
TNFRSF1AP19438 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1AP19438 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1AP19438 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF1AP19438 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF1AP19438 KRT18P60-201ENST00000312876 1297 ntBASIC20.54■□□□□ 0.88
TNFRSF1AP19438 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF1AP19438 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF1AP19438 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
TNFRSF1AP19438 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.54■□□□□ 0.88
TNFRSF1AP19438 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF1AP19438 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
TNFRSF1AP19438 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF1AP19438 AC012354.3-201ENST00000623734 483 ntBASIC20.53■□□□□ 0.88
TNFRSF1AP19438 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF1AP19438 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1AP19438 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1AP19438 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1AP19438 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFRSF1AP19438 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1AP19438 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TNFRSF1AP19438 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFRSF1AP19438 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TNFRSF1AP19438 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TNFRSF1AP19438 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TNFRSF1AP19438 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF1AP19438 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF1AP19438 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TNFRSF1AP19438 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF1AP19438 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF1AP19438 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF1AP19438 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF1AP19438 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF1AP19438 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF1AP19438 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TNFRSF1AP19438 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF1AP19438 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF1AP19438 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF1AP19438 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TNFRSF1AP19438 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF1AP19438 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms