Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CXCL1P09341 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL1P09341 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL1P09341 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL1P09341 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.82■□□□□ 0.6
CXCL1P09341 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.82■□□□□ 0.6
CXCL1P09341 AC100797.4-201ENST00000631653 1827 ntBASIC18.82■□□□□ 0.6
CXCL1P09341 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL1P09341 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CXCL1P09341 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CXCL1P09341 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL1P09341 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL1P09341 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL1P09341 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CXCL1P09341 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL1P09341 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL1P09341 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCL1P09341 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCL1P09341 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL1P09341 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CXCL1P09341 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL1P09341 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL1P09341 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL1P09341 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL1P09341 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL1P09341 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL1P09341 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL1P09341 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL1P09341 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL1P09341 AP002414.2-202ENST00000590929 1450 ntBASIC18.79■□□□□ 0.6
CXCL1P09341 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.79■□□□□ 0.6
CXCL1P09341 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL1P09341 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL1P09341 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL1P09341 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL1P09341 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL1P09341 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL1P09341 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CXCL1P09341 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL1P09341 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL1P09341 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL1P09341 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL1P09341 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL1P09341 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.78■□□□□ 0.6
CXCL1P09341 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CXCL1P09341 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.78■□□□□ 0.6
CXCL1P09341 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL1P09341 AC127502.1-201ENST00000399971 1502 ntBASIC18.77■□□□□ 0.6
CXCL1P09341 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CXCL1P09341 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CXCL1P09341 AC022211.4-201ENST00000625094 2161 ntBASIC18.76■□□□□ 0.59
CXCL1P09341 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.76■□□□□ 0.59
CXCL1P09341 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL1P09341 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL1P09341 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL1P09341 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CXCL1P09341 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.75■□□□□ 0.59
CXCL1P09341 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.75■□□□□ 0.59
CXCL1P09341 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXCL1P09341 AL024507.2-201ENST00000606070 2574 ntBASIC18.75■□□□□ 0.59
CXCL1P09341 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXCL1P09341 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXCL1P09341 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CXCL1P09341 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCL1P09341 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.74■□□□□ 0.59
CXCL1P09341 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCL1P09341 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCL1P09341 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCL1P09341 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.74■□□□□ 0.59
CXCL1P09341 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCL1P09341 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.73■□□□□ 0.59
CXCL1P09341 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.73■□□□□ 0.59
CXCL1P09341 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.73■□□□□ 0.59
CXCL1P09341 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCL1P09341 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCL1P09341 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCL1P09341 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCL1P09341 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCL1P09341 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXCL1P09341 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXCL1P09341 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CXCL1P09341 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXCL1P09341 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.72■□□□□ 0.59
CXCL1P09341 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.72■□□□□ 0.59
CXCL1P09341 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CXCL1P09341 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCL1P09341 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCL1P09341 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCL1P09341 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CXCL1P09341 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CXCL1P09341 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCL1P09341 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL1P09341 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL1P09341 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.7■□□□□ 0.58
CXCL1P09341 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL1P09341 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CXCL1P09341 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL1P09341 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL1P09341 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL1P09341 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms