Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAF1P04049 AC145676.1-201ENST00000514988 2004 ntBASIC21.89■■□□□ 1.09
RAF1P04049 WHAMMP2-203ENST00000563942 1603 ntBASIC21.88■■□□□ 1.09
RAF1P04049 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAF1P04049 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.88■■□□□ 1.09
RAF1P04049 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAF1P04049 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RAF1P04049 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RAF1P04049 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAF1P04049 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
RAF1P04049 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.87■■□□□ 1.09
RAF1P04049 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAF1P04049 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.87■■□□□ 1.09
RAF1P04049 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAF1P04049 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
RAF1P04049 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RAF1P04049 AC110285.7-201ENST00000624417 1536 ntBASIC21.86■■□□□ 1.09
RAF1P04049 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAF1P04049 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
RAF1P04049 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
RAF1P04049 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAF1P04049 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.85■■□□□ 1.09
RAF1P04049 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.85■■□□□ 1.09
RAF1P04049 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAF1P04049 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.85■■□□□ 1.09
RAF1P04049 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAF1P04049 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.85■■□□□ 1.09
RAF1P04049 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAF1P04049 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAF1P04049 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAF1P04049 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAF1P04049 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAF1P04049 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAF1P04049 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.84■■□□□ 1.09
RAF1P04049 KRT18P60-201ENST00000312876 1297 ntBASIC21.83■■□□□ 1.09
RAF1P04049 AC004987.1-201ENST00000428627 508 ntBASIC21.83■■□□□ 1.09
RAF1P04049 ATP5G2P3-201ENST00000429083 425 ntBASIC21.83■■□□□ 1.09
RAF1P04049 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAF1P04049 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAF1P04049 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.82■■□□□ 1.08
RAF1P04049 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAF1P04049 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.82■■□□□ 1.08
RAF1P04049 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAF1P04049 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAF1P04049 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
RAF1P04049 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RAF1P04049 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAF1P04049 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAF1P04049 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAF1P04049 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.81■■□□□ 1.08
RAF1P04049 AC092296.2-201ENST00000589470 999 ntBASIC21.81■■□□□ 1.08
RAF1P04049 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAF1P04049 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.81■■□□□ 1.08
RAF1P04049 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAF1P04049 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RAF1P04049 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.81■■□□□ 1.08
RAF1P04049 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.8■■□□□ 1.08
RAF1P04049 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAF1P04049 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAF1P04049 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.8■■□□□ 1.08
RAF1P04049 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.8■■□□□ 1.08
RAF1P04049 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RAF1P04049 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RAF1P04049 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.79■■□□□ 1.08
RAF1P04049 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAF1P04049 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAF1P04049 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.79■■□□□ 1.08
RAF1P04049 MIR219A2-201ENST00000608502 1504 ntBASIC21.79■■□□□ 1.08
RAF1P04049 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAF1P04049 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.79■■□□□ 1.08
RAF1P04049 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.79■■□□□ 1.08
RAF1P04049 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAF1P04049 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.78■■□□□ 1.08
RAF1P04049 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.78■■□□□ 1.08
RAF1P04049 ECEL1P2-201ENST00000461596 1295 ntBASIC21.78■■□□□ 1.08
RAF1P04049 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.78■■□□□ 1.08
RAF1P04049 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.78■■□□□ 1.08
RAF1P04049 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.78■■□□□ 1.08
RAF1P04049 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAF1P04049 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAF1P04049 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAF1P04049 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RAF1P04049 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAF1P04049 RARRES2P1-201ENST00000474487 481 ntBASIC21.77■■□□□ 1.08
RAF1P04049 AC126177.7-201ENST00000547904 679 ntBASIC21.77■■□□□ 1.08
RAF1P04049 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAF1P04049 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.07
RAF1P04049 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAF1P04049 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.76■■□□□ 1.07
RAF1P04049 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAF1P04049 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.76■■□□□ 1.07
RAF1P04049 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.76■■□□□ 1.07
RAF1P04049 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAF1P04049 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAF1P04049 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAF1P04049 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.75■■□□□ 1.07
RAF1P04049 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAF1P04049 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RAF1P04049 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAF1P04049 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms