Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
CPNE3O75131 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CPNE3O75131 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE3O75131 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE3O75131 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE3O75131 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE3O75131 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CPNE3O75131 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.29■■□□□ 1.32
CPNE3O75131 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.29■■□□□ 1.32
CPNE3O75131 AC142086.6-201ENST00000621154 1765 ntBASIC23.29■■□□□ 1.32
CPNE3O75131 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE3O75131 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.28■■□□□ 1.32
CPNE3O75131 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.28■■□□□ 1.32
CPNE3O75131 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE3O75131 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPNE3O75131 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CPNE3O75131 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPNE3O75131 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CPNE3O75131 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.26■■□□□ 1.31
CPNE3O75131 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.26■■□□□ 1.31
CPNE3O75131 RARRES2P1-201ENST00000474487 481 ntBASIC23.26■■□□□ 1.31
CPNE3O75131 SPCS2P3-201ENST00000500401 656 ntBASIC23.26■■□□□ 1.31
CPNE3O75131 MIR6765-201ENST00000614092 87 ntBASIC23.26■■□□□ 1.31
CPNE3O75131 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPNE3O75131 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.26■■□□□ 1.31
CPNE3O75131 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.25■■□□□ 1.31
CPNE3O75131 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CPNE3O75131 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPNE3O75131 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPNE3O75131 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CPNE3O75131 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPNE3O75131 AC018755.3-202ENST00000596210 929 ntBASIC23.24■■□□□ 1.31
CPNE3O75131 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CPNE3O75131 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CPNE3O75131 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.24■■□□□ 1.31
CPNE3O75131 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPNE3O75131 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPNE3O75131 BHLHE23-202ENST00000612929 1109 ntBASIC23.23■■□□□ 1.31
CPNE3O75131 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CPNE3O75131 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CPNE3O75131 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE3O75131 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE3O75131 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE3O75131 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.22■■□□□ 1.31
CPNE3O75131 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE3O75131 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CPNE3O75131 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.21■■□□□ 1.31
CPNE3O75131 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.21■■□□□ 1.31
CPNE3O75131 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
CPNE3O75131 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPNE3O75131 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CPNE3O75131 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPNE3O75131 LINC01003-201ENST00000564834 1764 ntBASIC23.2■■□□□ 1.3
CPNE3O75131 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.2■■□□□ 1.3
CPNE3O75131 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.2■■□□□ 1.3
CPNE3O75131 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.2■■□□□ 1.3
CPNE3O75131 AC139795.1-202ENST00000500444 432 ntBASIC23.2■■□□□ 1.3
CPNE3O75131 AC074183.2-201ENST00000623112 922 ntBASIC23.2■■□□□ 1.3
CPNE3O75131 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.19■■□□□ 1.3
CPNE3O75131 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE3O75131 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE3O75131 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE3O75131 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE3O75131 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.19■■□□□ 1.3
CPNE3O75131 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.19■■□□□ 1.3
CPNE3O75131 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE3O75131 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE3O75131 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.17■■□□□ 1.3
CPNE3O75131 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE3O75131 AL449106.1-201ENST00000608517 1980 ntBASIC23.16■■□□□ 1.3
CPNE3O75131 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE3O75131 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.16■■□□□ 1.3
CPNE3O75131 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE3O75131 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE3O75131 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE3O75131 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CPNE3O75131 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE3O75131 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.15■■□□□ 1.3
CPNE3O75131 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.14■■□□□ 1.3
CPNE3O75131 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CPNE3O75131 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
CPNE3O75131 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.14■■□□□ 1.29
CPNE3O75131 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.14■■□□□ 1.29
CPNE3O75131 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.14■■□□□ 1.29
CPNE3O75131 AC010980.1-201ENST00000587192 1142 ntBASIC23.14■■□□□ 1.29
CPNE3O75131 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPNE3O75131 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.14■■□□□ 1.29
CPNE3O75131 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.13■■□□□ 1.29
CPNE3O75131 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.13■■□□□ 1.29
CPNE3O75131 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE3O75131 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CPNE3O75131 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE3O75131 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE3O75131 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE3O75131 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE3O75131 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE3O75131 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE3O75131 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE3O75131 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE3O75131 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms