Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPB4C9JG80 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.69■■□□□ 1.06
NPIPB4C9JG80 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.69■■□□□ 1.06
NPIPB4C9JG80 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPB4C9JG80 AC060814.1-201ENST00000554326 538 ntBASIC21.69■■□□□ 1.06
NPIPB4C9JG80 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPB4C9JG80 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPB4C9JG80 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPB4C9JG80 AL157400.5-201ENST00000507624 621 ntBASIC21.68■■□□□ 1.06
NPIPB4C9JG80 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.68■■□□□ 1.06
NPIPB4C9JG80 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPB4C9JG80 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPB4C9JG80 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NPIPB4C9JG80 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPB4C9JG80 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPB4C9JG80 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPB4C9JG80 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPB4C9JG80 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.67■■□□□ 1.06
NPIPB4C9JG80 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.67■■□□□ 1.06
NPIPB4C9JG80 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.67■■□□□ 1.06
NPIPB4C9JG80 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.67■■□□□ 1.06
NPIPB4C9JG80 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
NPIPB4C9JG80 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB4C9JG80 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB4C9JG80 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB4C9JG80 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NPIPB4C9JG80 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB4C9JG80 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NPIPB4C9JG80 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.66■■□□□ 1.06
NPIPB4C9JG80 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB4C9JG80 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB4C9JG80 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPB4C9JG80 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPB4C9JG80 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.65■■□□□ 1.06
NPIPB4C9JG80 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPB4C9JG80 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPB4C9JG80 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NPIPB4C9JG80 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.65■■□□□ 1.06
NPIPB4C9JG80 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NPIPB4C9JG80 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.64■■□□□ 1.05
NPIPB4C9JG80 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.64■■□□□ 1.05
NPIPB4C9JG80 AC025884.2-201ENST00000553429 711 ntBASIC21.64■■□□□ 1.05
NPIPB4C9JG80 AC092296.2-201ENST00000589470 999 ntBASIC21.64■■□□□ 1.05
NPIPB4C9JG80 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.64■■□□□ 1.05
NPIPB4C9JG80 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NPIPB4C9JG80 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPIPB4C9JG80 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPB4C9JG80 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.63■■□□□ 1.05
NPIPB4C9JG80 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPB4C9JG80 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPB4C9JG80 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPIPB4C9JG80 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPIPB4C9JG80 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.62■■□□□ 1.05
NPIPB4C9JG80 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.62■■□□□ 1.05
NPIPB4C9JG80 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB4C9JG80 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB4C9JG80 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB4C9JG80 ERN1-208ENST00000606895 2068 ntBASIC21.61■■□□□ 1.05
NPIPB4C9JG80 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB4C9JG80 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.61■■□□□ 1.05
NPIPB4C9JG80 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.61■■□□□ 1.05
NPIPB4C9JG80 MIR4449-201ENST00000578365 66 ntBASIC21.61■■□□□ 1.05
NPIPB4C9JG80 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB4C9JG80 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB4C9JG80 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.6■■□□□ 1.05
NPIPB4C9JG80 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPB4C9JG80 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPB4C9JG80 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.6■■□□□ 1.05
NPIPB4C9JG80 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
NPIPB4C9JG80 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPB4C9JG80 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPB4C9JG80 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPB4C9JG80 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.59■■□□□ 1.05
NPIPB4C9JG80 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NPIPB4C9JG80 ECEL1P2-201ENST00000461596 1295 ntBASIC21.58■■□□□ 1.05
NPIPB4C9JG80 MIR3960-201ENST00000583311 91 ntBASIC21.58■■□□□ 1.05
NPIPB4C9JG80 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NPIPB4C9JG80 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NPIPB4C9JG80 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.58■■□□□ 1.05
NPIPB4C9JG80 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NPIPB4C9JG80 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.58■■□□□ 1.04
NPIPB4C9JG80 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPB4C9JG80 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPB4C9JG80 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPB4C9JG80 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPB4C9JG80 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NPIPB4C9JG80 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NPIPB4C9JG80 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.56■■□□□ 1.04
NPIPB4C9JG80 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPB4C9JG80 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPB4C9JG80 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.56■■□□□ 1.04
NPIPB4C9JG80 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPB4C9JG80 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.55■■□□□ 1.04
NPIPB4C9JG80 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPB4C9JG80 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.55■■□□□ 1.04
NPIPB4C9JG80 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NPIPB4C9JG80 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
NPIPB4C9JG80 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPB4C9JG80 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.55■■□□□ 1.04
NPIPB4C9JG80 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms