Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRGV8A0A0C4DH27 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRGV8A0A0C4DH27 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
TRGV8A0A0C4DH27 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRGV8A0A0C4DH27 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRGV8A0A0C4DH27 WHAMMP3-201ENST00000611636 1609 ntBASIC21.88■■□□□ 1.09
TRGV8A0A0C4DH27 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.88■■□□□ 1.09
TRGV8A0A0C4DH27 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TRGV8A0A0C4DH27 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRGV8A0A0C4DH27 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRGV8A0A0C4DH27 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRGV8A0A0C4DH27 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRGV8A0A0C4DH27 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRGV8A0A0C4DH27 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.87■■□□□ 1.09
TRGV8A0A0C4DH27 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
TRGV8A0A0C4DH27 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRGV8A0A0C4DH27 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.87■■□□□ 1.09
TRGV8A0A0C4DH27 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.86■■□□□ 1.09
TRGV8A0A0C4DH27 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
TRGV8A0A0C4DH27 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRGV8A0A0C4DH27 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRGV8A0A0C4DH27 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.86■■□□□ 1.09
TRGV8A0A0C4DH27 AL356441.2-201ENST00000443009 864 ntBASIC21.86■■□□□ 1.09
TRGV8A0A0C4DH27 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.86■■□□□ 1.09
TRGV8A0A0C4DH27 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRGV8A0A0C4DH27 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRGV8A0A0C4DH27 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRGV8A0A0C4DH27 AC239859.2-201ENST00000444165 318 ntBASIC21.85■■□□□ 1.09
TRGV8A0A0C4DH27 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.85■■□□□ 1.09
TRGV8A0A0C4DH27 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRGV8A0A0C4DH27 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.84■■□□□ 1.09
TRGV8A0A0C4DH27 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRGV8A0A0C4DH27 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRGV8A0A0C4DH27 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.84■■□□□ 1.09
TRGV8A0A0C4DH27 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TRGV8A0A0C4DH27 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRGV8A0A0C4DH27 ABCB10P1-201ENST00000614297 2181 ntBASIC21.84■■□□□ 1.09
TRGV8A0A0C4DH27 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRGV8A0A0C4DH27 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRGV8A0A0C4DH27 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRGV8A0A0C4DH27 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.83■■□□□ 1.09
TRGV8A0A0C4DH27 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.83■■□□□ 1.09
TRGV8A0A0C4DH27 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRGV8A0A0C4DH27 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRGV8A0A0C4DH27 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRGV8A0A0C4DH27 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRGV8A0A0C4DH27 AC087393.1-201ENST00000582896 145 ntBASIC21.82■■□□□ 1.08
TRGV8A0A0C4DH27 AC019171.1-201ENST00000601251 1056 ntBASIC21.82■■□□□ 1.08
TRGV8A0A0C4DH27 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.82■■□□□ 1.08
TRGV8A0A0C4DH27 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.82■■□□□ 1.08
TRGV8A0A0C4DH27 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRGV8A0A0C4DH27 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRGV8A0A0C4DH27 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.81■■□□□ 1.08
TRGV8A0A0C4DH27 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRGV8A0A0C4DH27 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.81■■□□□ 1.08
TRGV8A0A0C4DH27 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.81■■□□□ 1.08
TRGV8A0A0C4DH27 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.81■■□□□ 1.08
TRGV8A0A0C4DH27 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRGV8A0A0C4DH27 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRGV8A0A0C4DH27 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRGV8A0A0C4DH27 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRGV8A0A0C4DH27 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRGV8A0A0C4DH27 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRGV8A0A0C4DH27 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRGV8A0A0C4DH27 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.8■■□□□ 1.08
TRGV8A0A0C4DH27 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TRGV8A0A0C4DH27 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TRGV8A0A0C4DH27 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRGV8A0A0C4DH27 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRGV8A0A0C4DH27 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.79■■□□□ 1.08
TRGV8A0A0C4DH27 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.79■■□□□ 1.08
TRGV8A0A0C4DH27 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.79■■□□□ 1.08
TRGV8A0A0C4DH27 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRGV8A0A0C4DH27 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRGV8A0A0C4DH27 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRGV8A0A0C4DH27 RPS2P7-201ENST00000447334 885 ntBASIC21.78■■□□□ 1.08
TRGV8A0A0C4DH27 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRGV8A0A0C4DH27 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.78■■□□□ 1.08
TRGV8A0A0C4DH27 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRGV8A0A0C4DH27 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.77■■□□□ 1.08
TRGV8A0A0C4DH27 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRGV8A0A0C4DH27 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRGV8A0A0C4DH27 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRGV8A0A0C4DH27 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRGV8A0A0C4DH27 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRGV8A0A0C4DH27 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRGV8A0A0C4DH27 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.76■■□□□ 1.07
TRGV8A0A0C4DH27 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRGV8A0A0C4DH27 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRGV8A0A0C4DH27 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRGV8A0A0C4DH27 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRGV8A0A0C4DH27 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRGV8A0A0C4DH27 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRGV8A0A0C4DH27 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.74■■□□□ 1.07
TRGV8A0A0C4DH27 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TRGV8A0A0C4DH27 Z92544.1-202ENST00000571933 1220 ntBASIC21.74■■□□□ 1.07
TRGV8A0A0C4DH27 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRGV8A0A0C4DH27 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.74■■□□□ 1.07
TRGV8A0A0C4DH27 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
TRGV8A0A0C4DH27 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms