Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.79■□□□□ 0.762e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.682e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.41■□□□□ 0.542e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.29■□□□□ 0.522e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-220ENST00000498431 667 ntTSL 1 (best)16.62■□□□□ 0.252e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.222e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.12e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.082e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.43■□□□□ 0.062e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-214ENST00000462317 1112 ntAPPRIS ALT2 TSL 315.35■□□□□ 0.052e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.18■□□□□ 0.022e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.14■□□□□ 0.012e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.34□□□□□ -0.112e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-222ENST00000610468 1162 ntTSL 1 (best)14.34□□□□□ -0.112e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.122e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC13.51□□□□□ -0.252e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC13.51□□□□□ -0.252e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC13.51□□□□□ -0.252e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-216ENST00000467134 619 ntTSL 1 (best)11.46□□□□□ -0.572e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC8.4□□□□□ -1.062e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.4□□□□□ -1.062e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.4□□□□□ -1.062e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.4□□□□□ -1.062e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.16□□□□□ -1.262e-6■□□□□ 8.2
SND1Q7KZF4 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.16□□□□□ -1.262e-6■□□□□ 8.2
SND1Q7KZF4 IDH1-206ENST00000451391 563 ntTSL 319.71■□□□□ 0.754e-7■□□□□ 8.2
SND1Q7KZF4 IDH1-204ENST00000417583 702 ntTSL 414.8□□□□□ -0.044e-7■□□□□ 8.2
SND1Q7KZF4 IDH1-208ENST00000481557 556 ntTSL 212.51□□□□□ -0.414e-7■□□□□ 8.2
SND1Q7KZF4 SNRPD3-204ENST00000439775 640 ntTSL 316.75■□□□□ 0.271e-9■□□□□ 8.2
SND1Q7KZF4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.251e-9■□□□□ 8.2
SND1Q7KZF4 MED24-214ENST00000535508 3334 ntTSL 214.33□□□□□ -0.111e-9■□□□□ 8.2
SND1Q7KZF4 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.121e-9■□□□□ 8.2
SND1Q7KZF4 MED24-201ENST00000356271 3446 ntTSL 2 BASIC13.57□□□□□ -0.241e-9■□□□□ 8.2
SND1Q7KZF4 MED24-209ENST00000491466 957 ntTSL 513.29□□□□□ -0.281e-9■□□□□ 8.2
SND1Q7KZF4 MED24-203ENST00000394127 3456 ntTSL 2 BASIC13.27□□□□□ -0.281e-9■□□□□ 8.2
SND1Q7KZF4 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC12□□□□□ -0.491e-9■□□□□ 8.2
SND1Q7KZF4 GART-213ENST00000467575 922 ntTSL 39.95□□□□□ -0.821e-9■□□□□ 8.2
SND1Q7KZF4 SNRPD3-203ENST00000404603 715 ntTSL 58.79□□□□□ -11e-9■□□□□ 8.2
SND1Q7KZF4 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.44□□□□□ -1.061e-9■□□□□ 8.2
SND1Q7KZF4 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.66□□□□□ -1.181e-9■□□□□ 8.2
SND1Q7KZF4 CCT2-211ENST00000550653 567 ntTSL 25.4□□□□□ -1.541e-9■□□□□ 8.2
SND1Q7KZF4 CTSA-206ENST00000480961 513 ntTSL 221.11■□□□□ 0.977e-11■□□□□ 8.2
SND1Q7KZF4 SLC12A4-212ENST00000573023 3649 ntTSL 520.85■□□□□ 0.932e-6■□□□□ 8.2
SND1Q7KZF4 ECE1-209ENST00000481130 578 ntTSL 416.95■□□□□ 0.32e-6■□□□□ 8.2
SND1Q7KZF4 GTF3C1-203ENST00000562609 2824 ntTSL 515.67■□□□□ 0.12e-6■□□□□ 8.2
SND1Q7KZF4 SLC12A4-210ENST00000572476 573 ntTSL 515.31■□□□□ 0.042e-6■□□□□ 8.2
SND1Q7KZF4 SLC12A4-218ENST00000576513 412 ntTSL 513.96□□□□□ -0.172e-6■□□□□ 8.2
SND1Q7KZF4 SLC12A4-214ENST00000574665 847 ntTSL 512.42□□□□□ -0.422e-6■□□□□ 8.2
SND1Q7KZF4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.94■■□□□ 1.746e-11■□□□□ 8.2
SND1Q7KZF4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.98■■□□□ 1.116e-11■□□□□ 8.2
SND1Q7KZF4 SAE1-207ENST00000596995 2106 ntTSL 220.48■□□□□ 0.876e-11■□□□□ 8.2
SND1Q7KZF4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.836e-11■□□□□ 8.2
SND1Q7KZF4 SAE1-204ENST00000414294 2211 ntTSL 219.84■□□□□ 0.776e-11■□□□□ 8.2
SND1Q7KZF4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.13■□□□□ 0.336e-11■□□□□ 8.2
SND1Q7KZF4 LAMB2-216ENST00000494831 582 ntTSL 212.41□□□□□ -0.422e-8■□□□□ 8.2
SND1Q7KZF4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.241e-6■□□□□ 8.2
SND1Q7KZF4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.41e-6■□□□□ 8.2
SND1Q7KZF4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.681e-6■□□□□ 8.2
SND1Q7KZF4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.48■■□□□ 1.034e-12■□□□□ 8.2
SND1Q7KZF4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.54■□□□□ 0.884e-12■□□□□ 8.2
SND1Q7KZF4 KRT19-203ENST00000462611 504 ntTSL 216.81■□□□□ 0.284e-12■□□□□ 8.2
SND1Q7KZF4 KRT19-206ENST00000479031 427 ntTSL 215.06■□□□□ 04e-12■□□□□ 8.2
SND1Q7KZF4 CCT5-203ENST00000503026 1933 ntTSL 2 BASIC12.13□□□□□ -0.474e-12■□□□□ 8.2
SND1Q7KZF4 CCT5-210ENST00000511995 1091 ntTSL 29.73□□□□□ -0.854e-12■□□□□ 8.2
SND1Q7KZF4 CCT5-213ENST00000515390 1728 ntTSL 2 BASIC9.44□□□□□ -0.94e-12■□□□□ 8.2
SND1Q7KZF4 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.014e-12■□□□□ 8.2
SND1Q7KZF4 STIP1-208ENST00000540501 880 ntTSL 326.81■■□□□ 1.881e-6■□□□□ 8.2
SND1Q7KZF4 STIP1-211ENST00000543847 772 ntTSL 1 (best) BASIC11.03□□□□□ -0.641e-6■□□□□ 8.2
SND1Q7KZF4 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.522e-14■□□□□ 8.2
SND1Q7KZF4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.9■□□□□ 0.461e-15■□□□□ 8.2
SND1Q7KZF4 DDX5-205ENST00000577922 996 ntTSL 521.09■□□□□ 0.974e-18■□□□□ 8.1
SND1Q7KZF4 DDX5-220ENST00000581806 576 ntTSL 416.8■□□□□ 0.284e-18■□□□□ 8.1
SND1Q7KZF4 DDX5-219ENST00000581697 580 ntTSL 515.76■□□□□ 0.114e-18■□□□□ 8.1
SND1Q7KZF4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.02■□□□□ -04e-18■□□□□ 8.1
SND1Q7KZF4 DDX5-207ENST00000578400 575 ntTSL 514.36□□□□□ -0.114e-18■□□□□ 8.1
SND1Q7KZF4 DDX5-227ENST00000583894 712 ntTSL 210.42□□□□□ -0.744e-18■□□□□ 8.1
SND1Q7KZF4 DDX5-206ENST00000578190 582 ntTSL 37.98□□□□□ -1.134e-18■□□□□ 8.1
SND1Q7KZF4 DDX5-204ENST00000577787 838 ntTSL 26.87□□□□□ -1.314e-18■□□□□ 8.1
SND1Q7KZF4 DDX5-230ENST00000584549 807 ntTSL 26.87□□□□□ -1.314e-18■□□□□ 8.1
SND1Q7KZF4 DDX5-225ENST00000583562 465 ntTSL 1 (best)6.39□□□□□ -1.394e-18■□□□□ 8.1
SND1Q7KZF4 HNRNPU-217ENST00000638952 5678 ntTSL 519.09■□□□□ 0.652e-20■□□□□ 8.1
SND1Q7KZF4 HNRNPU-228ENST00000640306 2917 ntTSL 518.4■□□□□ 0.542e-20■□□□□ 8.1
SND1Q7KZF4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.52e-20■□□□□ 8.1
SND1Q7KZF4 HNRNPU-209ENST00000476241 4844 ntTSL 517.97■□□□□ 0.472e-20■□□□□ 8.1
SND1Q7KZF4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.332e-20■□□□□ 8.1
SND1Q7KZF4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.192e-20■□□□□ 8.1
SND1Q7KZF4 CES2-210ENST00000568347 832 ntTSL 416.04■□□□□ 0.161e-6■□□□□ 8.1
SND1Q7KZF4 CES2-206ENST00000564420 862 ntTSL 315.55■□□□□ 0.081e-6■□□□□ 8.1
SND1Q7KZF4 CES2-209ENST00000567128 440 ntTSL 212.14□□□□□ -0.471e-6■□□□□ 8.1
SND1Q7KZF4 ADAM9-209ENST00000487273 3839 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.641e-9■□□□□ 8.1
SND1Q7KZF4 ADAM9-201ENST00000379917 3836 ntTSL 1 (best)10.94□□□□□ -0.661e-9■□□□□ 8.1
SND1Q7KZF4 ADAM9-204ENST00000468065 3755 ntTSL 1 (best)10.44□□□□□ -0.741e-9■□□□□ 8.1
SND1Q7KZF4 ADAM9-207ENST00000481873 3793 ntTSL 1 (best)10.44□□□□□ -0.741e-9■□□□□ 8.1
SND1Q7KZF4 ADAM9-202ENST00000463437 583 ntTSL 26.81□□□□□ -1.321e-9■□□□□ 8.1
SND1Q7KZF4 C5-205ENST00000489802 382 ntTSL 32.79□□□□□ -1.961e-9■□□□□ 8.1
SND1Q7KZF4 ACTN1-217ENST00000556203 564 ntTSL 315.73■□□□□ 0.113e-8■□□□□ 8.1
SND1Q7KZF4 UBE2D3-214ENST00000503282 584 ntTSL 222.81■■□□□ 1.243e-6■□□□□ 8.1
SND1Q7KZF4 UBE2D3-216ENST00000503742 1977 ntTSL 1 (best)22.7■■□□□ 1.233e-6■□□□□ 8.1
SND1Q7KZF4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.223e-6■□□□□ 8.1
SND1Q7KZF4 UBE2D3-229ENST00000510129 582 ntTSL 322.12■■□□□ 1.133e-6■□□□□ 8.1
Retrieved 100 of 13,567 protein–RNA pairs in 47.2 ms