RNA–Protein interactions for RNA: ENST00000481557.1

IDH1-208, Transcript of isocitrate dehydrogenase (NADP(+)) 1, cytosolic, humanhuman

TSL 2

Gene IDH1, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH1-208ENST00000481557 NISCHQ9Y2I1 1504 aa30.44■■■□□ 2.46
IDH1-208ENST00000481557 CCDC180Q9P1Z9 1646 aa27.25■■□□□ 1.95
IDH1-208ENST00000481557 ABCC9O60706 1549 aa26.96■■□□□ 1.91
IDH1-208ENST00000481557 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
IDH1-208ENST00000481557 NACADO15069 1562 aa25.68■■□□□ 1.7
IDH1-208ENST00000481557 DCAF8L2P0C7V8 631 aa25.45■■□□□ 1.66
IDH1-208ENST00000481557 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
IDH1-208ENST00000481557 UNC13AQ9UPW8 1703 aa25.32■■□□□ 1.64
IDH1-208ENST00000481557 ZCCHC6Q5VYS8 1495 aaKnown RBP25.29■■□□□ 1.64
IDH1-208ENST00000481557 DCAF1Q9Y4B6 1507 aa25.18■■□□□ 1.62
IDH1-208ENST00000481557 DNAJC5BQ9UF47 199 aa25.15■■□□□ 1.62
IDH1-208ENST00000481557 PABPN1Q86U42 306 aaKnown RBP eCLIP25.12■■□□□ 1.61
IDH1-208ENST00000481557 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
IDH1-208ENST00000481557 SCRIBQ14160 1630 aa24.79■■□□□ 1.56
IDH1-208ENST00000481557 SHROOM4Q9ULL8 1493 aa24.72■■□□□ 1.55
IDH1-208ENST00000481557 CC2D2AQ9P2K1 1620 aa24.42■■□□□ 1.5
IDH1-208ENST00000481557 EIF4G1Q04637 1599 aaKnown RBP24.42■■□□□ 1.5
IDH1-208ENST00000481557 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
IDH1-208ENST00000481557 SMARCA4P51532 1647 aa23.71■■□□□ 1.39
IDH1-208ENST00000481557 NCAPD3P42695 1498 aa23.71■■□□□ 1.39
IDH1-208ENST00000481557 ATAD2BQ9ULI0 1458 aa23.67■■□□□ 1.38
IDH1-208ENST00000481557 BAZ1AQ9NRL2 1556 aaPredicted RBP23.6■■□□□ 1.37
IDH1-208ENST00000481557 SMARCA2P51531 1590 aa23.59■■□□□ 1.37
IDH1-208ENST00000481557 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
IDH1-208ENST00000481557 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
IDH1-208ENST00000481557 MROH2BQ7Z745 1585 aa23.47■■□□□ 1.35
IDH1-208ENST00000481557 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
IDH1-208ENST00000481557 NESP48681 1621 aa23.26■■□□□ 1.31
IDH1-208ENST00000481557 ERCC6Q03468 1493 aa23.21■■□□□ 1.31
IDH1-208ENST00000481557 WIZO95785 1651 aa23.21■■□□□ 1.31
IDH1-208ENST00000481557 CUX2O14529 1486 aa23.16■■□□□ 1.3
IDH1-208ENST00000481557 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.29
IDH1-208ENST00000481557 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
IDH1-208ENST00000481557 THOC2Q8NI27 1593 aaKnown RBP23.01■■□□□ 1.27
IDH1-208ENST00000481557 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
IDH1-208ENST00000481557 CADPSQ9ULU8 1353 aa22.97■■□□□ 1.27
IDH1-208ENST00000481557 PDS5BQ9NTI5 1447 aa22.94■■□□□ 1.26
IDH1-208ENST00000481557 TOP2AP11388 1531 aaKnown RBP22.91■■□□□ 1.26
IDH1-208ENST00000481557 DNAJC5Q9H3Z4 198 aa22.88■■□□□ 1.25
IDH1-208ENST00000481557 CFTRP13569 1480 aa22.78■■□□□ 1.24
IDH1-208ENST00000481557 MRC2Q9UBG0 1479 aa22.76■■□□□ 1.23
IDH1-208ENST00000481557 WDR62O43379 1518 aa22.73■■□□□ 1.23
IDH1-208ENST00000481557 FANCD2Q9BXW9 1451 aa22.71■■□□□ 1.23
IDH1-208ENST00000481557 CEP164Q9UPV0 1460 aa22.7■■□□□ 1.22
IDH1-208ENST00000481557 CCDC88BA6NC98 1476 aa22.65■■□□□ 1.22
IDH1-208ENST00000481557 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
IDH1-208ENST00000481557 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
IDH1-208ENST00000481557 TOPBP1Q92547 1522 aa22.32■■□□□ 1.16
IDH1-208ENST00000481557 ABCC8Q09428 1581 aa22.26■■□□□ 1.15
IDH1-208ENST00000481557 DNMBPQ6XZF7 1577 aa22.26■■□□□ 1.15
IDH1-208ENST00000481557 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
IDH1-208ENST00000481557 ZNF608Q9ULD9 1512 aaPredicted RBP22.21■■□□□ 1.15
IDH1-208ENST00000481557 TARBP1Q13395 1621 aaKnown RBP22.14■■□□□ 1.14
IDH1-208ENST00000481557 EIF4G3O43432 1585 aaKnown RBP22.11■■□□□ 1.13
IDH1-208ENST00000481557 POLA1P09884 1462 aaPredicted RBP22.1■■□□□ 1.13
IDH1-208ENST00000481557 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
IDH1-208ENST00000481557 OSCARQ8IYS5 282 aa22.09■■□□□ 1.13
IDH1-208ENST00000481557 CUX1P39880 1505 aa22.03■■□□□ 1.12
IDH1-208ENST00000481557 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.124e-7■■■■□ 23.2
IDH1-208ENST00000481557 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
IDH1-208ENST00000481557 FGD5Q6ZNL6 1462 aa21.99■■□□□ 1.11
IDH1-208ENST00000481557 SOGA1O94964 1423 aa21.98■■□□□ 1.11
IDH1-208ENST00000481557 CHD1O14646 1710 aa21.92■■□□□ 1.1
IDH1-208ENST00000481557 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
IDH1-208ENST00000481557 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.1
IDH1-208ENST00000481557 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
IDH1-208ENST00000481557 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
IDH1-208ENST00000481557 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
IDH1-208ENST00000481557 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
IDH1-208ENST00000481557 SNAPC4Q5SXM2 1469 aa21.8■■□□□ 1.08
IDH1-208ENST00000481557 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
IDH1-208ENST00000481557 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
IDH1-208ENST00000481557 GRIN2BQ13224 1484 aa21.77■■□□□ 1.07
IDH1-208ENST00000481557 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.07
IDH1-208ENST00000481557 MAGI1Q96QZ7 1491 aaPredicted RBP21.76■■□□□ 1.07
IDH1-208ENST00000481557 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
IDH1-208ENST00000481557 ABCA5Q8WWZ7 1642 aa21.75■■□□□ 1.07
IDH1-208ENST00000481557 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
IDH1-208ENST00000481557 FBLN2P98095 1184 aa21.73■■□□□ 1.07
IDH1-208ENST00000481557 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
IDH1-208ENST00000481557 GAPVD1Q14C86 1478 aa21.72■■□□□ 1.07
IDH1-208ENST00000481557 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
IDH1-208ENST00000481557 CLASP1Q7Z460 1538 aa21.68■■□□□ 1.06
IDH1-208ENST00000481557 SYNJ2O15056 1496 aa21.67■■□□□ 1.06
IDH1-208ENST00000481557 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
IDH1-208ENST00000481557 ARAP1Q96P48 1450 aa21.6■■□□□ 1.05
IDH1-208ENST00000481557 CYB5RLQ6IPT4 315 aa21.55■■□□□ 1.04
IDH1-208ENST00000481557 ADAMTS12P58397 1594 aa21.55■■□□□ 1.04
IDH1-208ENST00000481557 GRIN2AQ12879 1464 aa21.51■■□□□ 1.03
IDH1-208ENST00000481557 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
IDH1-208ENST00000481557 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
IDH1-208ENST00000481557 CEP170Q5SW79 1584 aa21.45■■□□□ 1.02
IDH1-208ENST00000481557 NUP160Q12769 1436 aa21.45■■□□□ 1.02
IDH1-208ENST00000481557 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
IDH1-208ENST00000481557 ERCC6L2Q5T890 1561 aa21.36■■□□□ 1.01
IDH1-208ENST00000481557 KIF27Q86VH2 1401 aa21.27■■□□□ 1
IDH1-208ENST00000481557 IGF1RP08069 1367 aa21.26■□□□□ 0.99
IDH1-208ENST00000481557 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
IDH1-208ENST00000481557 CUL7Q14999 1698 aa21.22■□□□□ 0.99
IDH1-208ENST00000481557 TRHP20396 242 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms