RNA–Protein interactions for RNA: ENST00000583894.1

DDX5-227, Transcript of DEAD-box helicase 5, humanhuman

TSL 2

Gene DDX5, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX5-227ENST00000583894 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
DDX5-227ENST00000583894 ABCC9O60706 1549 aa23.69■■□□□ 1.38
DDX5-227ENST00000583894 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
DDX5-227ENST00000583894 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
DDX5-227ENST00000583894 RB1CC1Q8TDY2 1594 aa22.32■■□□□ 1.16
DDX5-227ENST00000583894 NACADO15069 1562 aa22.07■■□□□ 1.12
DDX5-227ENST00000583894 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
DDX5-227ENST00000583894 DCAF8L2P0C7V8 631 aa21.96■■□□□ 1.11
DDX5-227ENST00000583894 UNC13AQ9UPW8 1703 aa21.78■■□□□ 1.08
DDX5-227ENST00000583894 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
DDX5-227ENST00000583894 MYO15BQ96JP2 1530 aa21.62■■□□□ 1.05
DDX5-227ENST00000583894 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.02
DDX5-227ENST00000583894 CC2D2AQ9P2K1 1620 aa21.36■■□□□ 1.01
DDX5-227ENST00000583894 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
DDX5-227ENST00000583894 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
DDX5-227ENST00000583894 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
DDX5-227ENST00000583894 DCAF1Q9Y4B6 1507 aa21.18■□□□□ 0.98
DDX5-227ENST00000583894 DNAJC5Q9H3Z4 198 aa21.14■□□□□ 0.97
DDX5-227ENST00000583894 SCRIBQ14160 1630 aa21.14■□□□□ 0.97
DDX5-227ENST00000583894 CUX2O14529 1486 aa20.59■□□□□ 0.89
DDX5-227ENST00000583894 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
DDX5-227ENST00000583894 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
DDX5-227ENST00000583894 ATAD2BQ9ULI0 1458 aa20.29■□□□□ 0.84
DDX5-227ENST00000583894 NESP48681 1621 aa20.23■□□□□ 0.83
DDX5-227ENST00000583894 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
DDX5-227ENST00000583894 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
DDX5-227ENST00000583894 SMARCA4P51532 1647 aa20.12■□□□□ 0.81
DDX5-227ENST00000583894 THOC2Q8NI27 1593 aaKnown RBP20.07■□□□□ 0.8
DDX5-227ENST00000583894 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
DDX5-227ENST00000583894 TRIM41Q8WV44 630 aa20.03■□□□□ 0.8
DDX5-227ENST00000583894 LAMC3Q9Y6N6 1575 aa19.98■□□□□ 0.79
DDX5-227ENST00000583894 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
DDX5-227ENST00000583894 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
DDX5-227ENST00000583894 PEG3Q9GZU2 1588 aa19.92■□□□□ 0.78
DDX5-227ENST00000583894 KIF21AQ7Z4S6 1674 aa19.9■□□□□ 0.78
DDX5-227ENST00000583894 MROH2BQ7Z745 1585 aa19.79■□□□□ 0.76
DDX5-227ENST00000583894 CADPSQ9ULU8 1353 aa19.79■□□□□ 0.76
DDX5-227ENST00000583894 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
DDX5-227ENST00000583894 WDR62O43379 1518 aa19.71■□□□□ 0.75
DDX5-227ENST00000583894 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
DDX5-227ENST00000583894 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
DDX5-227ENST00000583894 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
DDX5-227ENST00000583894 WIZO95785 1651 aa19.52■□□□□ 0.71
DDX5-227ENST00000583894 CFTRP13569 1480 aa19.45■□□□□ 0.7
DDX5-227ENST00000583894 URB2Q14146 1524 aaKnown RBP19.4■□□□□ 0.7
DDX5-227ENST00000583894 RIMBP3CA6NJZ7 1639 aa19.35■□□□□ 0.69
DDX5-227ENST00000583894 RIMBP3BA6NNM3 1639 aa19.35■□□□□ 0.69
DDX5-227ENST00000583894 RIMBP3Q9UFD9 1639 aa19.35■□□□□ 0.69
DDX5-227ENST00000583894 ARHGEF11O15085 1522 aa19.26■□□□□ 0.67
DDX5-227ENST00000583894 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
DDX5-227ENST00000583894 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
DDX5-227ENST00000583894 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
DDX5-227ENST00000583894 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
DDX5-227ENST00000583894 CYB5RLQ6IPT4 315 aa19.21■□□□□ 0.67
DDX5-227ENST00000583894 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
DDX5-227ENST00000583894 TRHP20396 242 aaPredicted RBP19.13■□□□□ 0.65
DDX5-227ENST00000583894 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
DDX5-227ENST00000583894 EIF4G3O43432 1585 aaKnown RBP19.07■□□□□ 0.64
DDX5-227ENST00000583894 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
DDX5-227ENST00000583894 ARAP1Q96P48 1450 aa19.05■□□□□ 0.64
DDX5-227ENST00000583894 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
DDX5-227ENST00000583894 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.648e-14■■■□□ 15.1
DDX5-227ENST00000583894 FBLN2P98095 1184 aa19.02■□□□□ 0.64
DDX5-227ENST00000583894 CHD1O14646 1710 aa19.01■□□□□ 0.63
DDX5-227ENST00000583894 DNMBPQ6XZF7 1577 aa18.98■□□□□ 0.63
DDX5-227ENST00000583894 TARBP1Q13395 1621 aaKnown RBP18.96■□□□□ 0.63
DDX5-227ENST00000583894 AEBP2Q6ZN18 517 aaPredicted RBP18.9■□□□□ 0.62
DDX5-227ENST00000583894 POLA1P09884 1462 aaPredicted RBP18.9■□□□□ 0.62
DDX5-227ENST00000583894 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
DDX5-227ENST00000583894 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
DDX5-227ENST00000583894 SOGA1O94964 1423 aa18.83■□□□□ 0.6
DDX5-227ENST00000583894 CHMP7Q8WUX9 453 aaPredicted RBP18.8■□□□□ 0.6
DDX5-227ENST00000583894 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
DDX5-227ENST00000583894 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
DDX5-227ENST00000583894 SYNJ1O43426 1573 aa18.75■□□□□ 0.59
DDX5-227ENST00000583894 MAGI1Q96QZ7 1491 aaPredicted RBP18.72■□□□□ 0.59
DDX5-227ENST00000583894 WDR97A6NE52 1622 aa18.71■□□□□ 0.59
DDX5-227ENST00000583894 FGD5Q6ZNL6 1462 aa18.71■□□□□ 0.59
DDX5-227ENST00000583894 GRIN2BQ13224 1484 aa18.69■□□□□ 0.58
DDX5-227ENST00000583894 SYNJ2O15056 1496 aa18.68■□□□□ 0.58
DDX5-227ENST00000583894 GAPVD1Q14C86 1478 aa18.66■□□□□ 0.58
DDX5-227ENST00000583894 CUX1P39880 1505 aa18.62■□□□□ 0.57
DDX5-227ENST00000583894 PBRM1Q86U86 1689 aa18.53■□□□□ 0.56
DDX5-227ENST00000583894 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
DDX5-227ENST00000583894 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
DDX5-227ENST00000583894 GRIN2AQ12879 1464 aa18.45■□□□□ 0.54
DDX5-227ENST00000583894 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
DDX5-227ENST00000583894 CEP170Q5SW79 1584 aa18.42■□□□□ 0.54
DDX5-227ENST00000583894 NUP160Q12769 1436 aa18.41■□□□□ 0.54
DDX5-227ENST00000583894 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
DDX5-227ENST00000583894 SHROOM2Q13796 1616 aa18.34■□□□□ 0.53
DDX5-227ENST00000583894 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.53
DDX5-227ENST00000583894 KIF13AQ9H1H9 1805 aa18.33■□□□□ 0.53
DDX5-227ENST00000583894 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
DDX5-227ENST00000583894 FAM69CQ0P6D2 419 aa18.28■□□□□ 0.52
DDX5-227ENST00000583894 PRG4Q92954 1404 aaPredicted RBP18.28■□□□□ 0.52
DDX5-227ENST00000583894 JPH4Q96JJ6 628 aa18.26■□□□□ 0.51
DDX5-227ENST00000583894 ABCC10Q5T3U5 1492 aa18.23■□□□□ 0.51
DDX5-227ENST00000583894 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDX5-227ENST00000583894 ERICH3Q5RHP9 1530 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms