RNA–Protein interactions for RNA: ENST00000417583.5

IDH1-204, Transcript of isocitrate dehydrogenase (NADP(+)) 1, cytosolic, humanhuman

TSL 4

Gene IDH1, Length 702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH1-204ENST00000417583 NISCHQ9Y2I1 1504 aa34.03■■■■□ 3.04
IDH1-204ENST00000417583 CCDC180Q9P1Z9 1646 aa30.42■■■□□ 2.46
IDH1-204ENST00000417583 ABCC9O60706 1549 aa29.89■■■□□ 2.38
IDH1-204ENST00000417583 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
IDH1-204ENST00000417583 NACADO15069 1562 aa28.66■■■□□ 2.18
IDH1-204ENST00000417583 DCAF8L2P0C7V8 631 aa28.54■■■□□ 2.16
IDH1-204ENST00000417583 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
IDH1-204ENST00000417583 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
IDH1-204ENST00000417583 DCAF1Q9Y4B6 1507 aa28.2■■■□□ 2.1
IDH1-204ENST00000417583 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
IDH1-204ENST00000417583 PABPN1Q86U42 306 aaKnown RBP eCLIP27.87■■■□□ 2.05
IDH1-204ENST00000417583 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
IDH1-204ENST00000417583 SCRIBQ14160 1630 aa27.66■■■□□ 2.02
IDH1-204ENST00000417583 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.01
IDH1-204ENST00000417583 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
IDH1-204ENST00000417583 EIF4G1Q04637 1599 aaKnown RBP27.11■■□□□ 1.93
IDH1-204ENST00000417583 CC2D2AQ9P2K1 1620 aa27.04■■□□□ 1.92
IDH1-204ENST00000417583 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
IDH1-204ENST00000417583 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
IDH1-204ENST00000417583 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.82
IDH1-204ENST00000417583 NCAPD3P42695 1498 aa26.41■■□□□ 1.82
IDH1-204ENST00000417583 SMARCA2P51531 1590 aa26.4■■□□□ 1.82
IDH1-204ENST00000417583 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
IDH1-204ENST00000417583 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
IDH1-204ENST00000417583 PEG3Q9GZU2 1588 aa26.22■■□□□ 1.79
IDH1-204ENST00000417583 BAZ1BQ9UIG0 1483 aaKnown RBP26.18■■□□□ 1.78
IDH1-204ENST00000417583 MROH2BQ7Z745 1585 aa26.17■■□□□ 1.78
IDH1-204ENST00000417583 WIZO95785 1651 aa25.88■■□□□ 1.73
IDH1-204ENST00000417583 ERCC6Q03468 1493 aa25.88■■□□□ 1.73
IDH1-204ENST00000417583 RSF1Q96T23 1441 aaPredicted RBP25.81■■□□□ 1.72
IDH1-204ENST00000417583 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
IDH1-204ENST00000417583 NESP48681 1621 aa25.76■■□□□ 1.71
IDH1-204ENST00000417583 CUX2O14529 1486 aa25.69■■□□□ 1.7
IDH1-204ENST00000417583 TOP2AP11388 1531 aaKnown RBP25.66■■□□□ 1.7
IDH1-204ENST00000417583 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
IDH1-204ENST00000417583 CADPSQ9ULU8 1353 aa25.63■■□□□ 1.69
IDH1-204ENST00000417583 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
IDH1-204ENST00000417583 THOC2Q8NI27 1593 aaKnown RBP25.46■■□□□ 1.67
IDH1-204ENST00000417583 CFTRP13569 1480 aa25.42■■□□□ 1.66
IDH1-204ENST00000417583 MRC2Q9UBG0 1479 aa25.35■■□□□ 1.65
IDH1-204ENST00000417583 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
IDH1-204ENST00000417583 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
IDH1-204ENST00000417583 CCDC88BA6NC98 1476 aa25.32■■□□□ 1.64
IDH1-204ENST00000417583 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
IDH1-204ENST00000417583 WDR62O43379 1518 aa25.26■■□□□ 1.63
IDH1-204ENST00000417583 PRDM2Q13029 1718 aa25.23■■□□□ 1.63
IDH1-204ENST00000417583 DNAJC5Q9H3Z4 198 aa25.11■■□□□ 1.61
IDH1-204ENST00000417583 URB2Q14146 1524 aaKnown RBP25.04■■□□□ 1.6
IDH1-204ENST00000417583 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
IDH1-204ENST00000417583 TOPBP1Q92547 1522 aa24.89■■□□□ 1.57
IDH1-204ENST00000417583 DNMBPQ6XZF7 1577 aa24.87■■□□□ 1.57
IDH1-204ENST00000417583 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
IDH1-204ENST00000417583 POLA1P09884 1462 aaPredicted RBP24.65■■□□□ 1.54
IDH1-204ENST00000417583 ZNF608Q9ULD9 1512 aaPredicted RBP24.64■■□□□ 1.53
IDH1-204ENST00000417583 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
IDH1-204ENST00000417583 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
IDH1-204ENST00000417583 CUX1P39880 1505 aa24.58■■□□□ 1.53
IDH1-204ENST00000417583 OSCARQ8IYS5 282 aa24.58■■□□□ 1.53
IDH1-204ENST00000417583 SOGA1O94964 1423 aa24.58■■□□□ 1.53
IDH1-204ENST00000417583 FGD5Q6ZNL6 1462 aa24.57■■□□□ 1.52
IDH1-204ENST00000417583 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
IDH1-204ENST00000417583 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
IDH1-204ENST00000417583 AQRO60306 1485 aaKnown RBP eCLIP24.5■■□□□ 1.514e-7■■■■□ 23.2
IDH1-204ENST00000417583 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
IDH1-204ENST00000417583 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
IDH1-204ENST00000417583 TOP2BQ02880 1626 aa24.36■■□□□ 1.49
IDH1-204ENST00000417583 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
IDH1-204ENST00000417583 GRIN2BQ13224 1484 aa24.34■■□□□ 1.49
IDH1-204ENST00000417583 ABCA10Q8WWZ4 1543 aa24.34■■□□□ 1.49
IDH1-204ENST00000417583 FBLN2P98095 1184 aa24.32■■□□□ 1.48
IDH1-204ENST00000417583 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
IDH1-204ENST00000417583 CHD1O14646 1710 aa24.31■■□□□ 1.48
IDH1-204ENST00000417583 GAPVD1Q14C86 1478 aa24.3■■□□□ 1.48
IDH1-204ENST00000417583 SNAPC4Q5SXM2 1469 aa24.29■■□□□ 1.48
IDH1-204ENST00000417583 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
IDH1-204ENST00000417583 CHMP7Q8WUX9 453 aaPredicted RBP24.24■■□□□ 1.47
IDH1-204ENST00000417583 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
IDH1-204ENST00000417583 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
IDH1-204ENST00000417583 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
IDH1-204ENST00000417583 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
IDH1-204ENST00000417583 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
IDH1-204ENST00000417583 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
IDH1-204ENST00000417583 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
IDH1-204ENST00000417583 ARHGEF11O15085 1522 aa24.13■■□□□ 1.45
IDH1-204ENST00000417583 ERICH3Q5RHP9 1530 aa24.08■■□□□ 1.45
IDH1-204ENST00000417583 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
IDH1-204ENST00000417583 ADAMTS12P58397 1594 aa24.03■■□□□ 1.44
IDH1-204ENST00000417583 FHAD1B1AJZ9 1412 aa24.02■■□□□ 1.44
IDH1-204ENST00000417583 GRIN2AQ12879 1464 aa24■■□□□ 1.43
IDH1-204ENST00000417583 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
IDH1-204ENST00000417583 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
IDH1-204ENST00000417583 CYB5RLQ6IPT4 315 aa23.92■■□□□ 1.42
IDH1-204ENST00000417583 NUP160Q12769 1436 aa23.89■■□□□ 1.41
IDH1-204ENST00000417583 ARAP1Q96P48 1450 aa23.88■■□□□ 1.41
IDH1-204ENST00000417583 CEP170Q5SW79 1584 aa23.85■■□□□ 1.41
IDH1-204ENST00000417583 CUL7Q14999 1698 aa23.83■■□□□ 1.4
IDH1-204ENST00000417583 IGF1RP08069 1367 aa23.8■■□□□ 1.4
IDH1-204ENST00000417583 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
IDH1-204ENST00000417583 CARMIL1Q5VZK9 1371 aa23.69■■□□□ 1.38
IDH1-204ENST00000417583 RUSC2Q8N2Y8 1516 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 213.5 ms