RNA–Protein interactions for RNA: ENST00000368393.7

MUC1-208, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-208ENST00000368393 NISCHQ9Y2I1 1504 aa31.88■■■□□ 2.69
MUC1-208ENST00000368393 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
MUC1-208ENST00000368393 ABCC9O60706 1549 aa27.39■■□□□ 1.98
MUC1-208ENST00000368393 ZCCHC6Q5VYS8 1495 aaKnown RBP26.62■■□□□ 1.85
MUC1-208ENST00000368393 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
MUC1-208ENST00000368393 NACADO15069 1562 aa26.45■■□□□ 1.82
MUC1-208ENST00000368393 DCAF1Q9Y4B6 1507 aa26.41■■□□□ 1.82
MUC1-208ENST00000368393 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
MUC1-208ENST00000368393 DCAF8L2P0C7V8 631 aa26.35■■□□□ 1.81
MUC1-208ENST00000368393 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
MUC1-208ENST00000368393 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
MUC1-208ENST00000368393 PABPN1Q86U42 306 aaKnown RBP eCLIP25.68■■□□□ 1.7
MUC1-208ENST00000368393 SCRIBQ14160 1630 aa25.67■■□□□ 1.7
MUC1-208ENST00000368393 SHROOM4Q9ULL8 1493 aa25.39■■□□□ 1.65
MUC1-208ENST00000368393 DNAJC5BQ9UF47 199 aa25.19■■□□□ 1.62
MUC1-208ENST00000368393 EIF4G1Q04637 1599 aaKnown RBP24.95■■□□□ 1.58
MUC1-208ENST00000368393 CECR2Q9BXF3 1484 aa24.88■■□□□ 1.57
MUC1-208ENST00000368393 CC2D2AQ9P2K1 1620 aa24.78■■□□□ 1.56
MUC1-208ENST00000368393 SMARCA4P51532 1647 aa24.63■■□□□ 1.53
MUC1-208ENST00000368393 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
MUC1-208ENST00000368393 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
MUC1-208ENST00000368393 ATAD2BQ9ULI0 1458 aa24.53■■□□□ 1.52
MUC1-208ENST00000368393 NCAPD3P42695 1498 aa24.51■■□□□ 1.51
MUC1-208ENST00000368393 PEG3Q9GZU2 1588 aa24.47■■□□□ 1.51
MUC1-208ENST00000368393 RSF1Q96T23 1441 aaPredicted RBP24.42■■□□□ 1.5
MUC1-208ENST00000368393 SMARCA2P51531 1590 aa24.38■■□□□ 1.49
MUC1-208ENST00000368393 HMGXB3Q12766 1538 aa24.32■■□□□ 1.48
MUC1-208ENST00000368393 WIZO95785 1651 aa24.25■■□□□ 1.47
MUC1-208ENST00000368393 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
MUC1-208ENST00000368393 TOP2AP11388 1531 aaKnown RBP24.02■■□□□ 1.44
MUC1-208ENST00000368393 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
MUC1-208ENST00000368393 NESP48681 1621 aa23.83■■□□□ 1.41
MUC1-208ENST00000368393 CCDC88BA6NC98 1476 aa23.81■■□□□ 1.4
MUC1-208ENST00000368393 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
MUC1-208ENST00000368393 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
MUC1-208ENST00000368393 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
MUC1-208ENST00000368393 CFTRP13569 1480 aa23.69■■□□□ 1.38
MUC1-208ENST00000368393 PDS5BQ9NTI5 1447 aa23.53■■□□□ 1.36
MUC1-208ENST00000368393 ERCC6Q03468 1493 aa23.47■■□□□ 1.35
MUC1-208ENST00000368393 FANCD2Q9BXW9 1451 aa23.44■■□□□ 1.34
MUC1-208ENST00000368393 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
MUC1-208ENST00000368393 THOC2Q8NI27 1593 aaKnown RBP23.38■■□□□ 1.33
MUC1-208ENST00000368393 CEP164Q9UPV0 1460 aa23.33■■□□□ 1.33
MUC1-208ENST00000368393 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
MUC1-208ENST00000368393 PRDM2Q13029 1718 aa23.28■■□□□ 1.32
MUC1-208ENST00000368393 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
MUC1-208ENST00000368393 CUX2O14529 1486 aa23.26■■□□□ 1.31
MUC1-208ENST00000368393 WDR62O43379 1518 aa23.26■■□□□ 1.31
MUC1-208ENST00000368393 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
MUC1-208ENST00000368393 TOPBP1Q92547 1522 aa23.11■■□□□ 1.29
MUC1-208ENST00000368393 DNMBPQ6XZF7 1577 aa23.05■■□□□ 1.28
MUC1-208ENST00000368393 CUX1P39880 1505 aa23.04■■□□□ 1.28
MUC1-208ENST00000368393 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
MUC1-208ENST00000368393 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
MUC1-208ENST00000368393 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
MUC1-208ENST00000368393 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
MUC1-208ENST00000368393 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
MUC1-208ENST00000368393 SYNJ1O43426 1573 aa22.88■■□□□ 1.25
MUC1-208ENST00000368393 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
MUC1-208ENST00000368393 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
MUC1-208ENST00000368393 ZNF608Q9ULD9 1512 aaPredicted RBP22.85■■□□□ 1.25
MUC1-208ENST00000368393 TOP2BQ02880 1626 aa22.84■■□□□ 1.25
MUC1-208ENST00000368393 SOGA1O94964 1423 aa22.82■■□□□ 1.24
MUC1-208ENST00000368393 BIVM-ERCC5R4GMW8 1640 aa22.81■■□□□ 1.24
MUC1-208ENST00000368393 AQRO60306 1485 aaKnown RBP eCLIP22.72■■□□□ 1.23
MUC1-208ENST00000368393 ABCA10Q8WWZ4 1543 aa22.71■■□□□ 1.23
MUC1-208ENST00000368393 TDRD9Q8NDG6 1382 aaKnown RBP22.7■■□□□ 1.22
MUC1-208ENST00000368393 WDR97A6NE52 1622 aa22.66■■□□□ 1.22
MUC1-208ENST00000368393 EIF4G3O43432 1585 aaKnown RBP22.64■■□□□ 1.22
MUC1-208ENST00000368393 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
MUC1-208ENST00000368393 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
MUC1-208ENST00000368393 GRIN2BQ13224 1484 aa22.51■■□□□ 1.19
MUC1-208ENST00000368393 SNAPC4Q5SXM2 1469 aa22.46■■□□□ 1.19
MUC1-208ENST00000368393 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
MUC1-208ENST00000368393 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
MUC1-208ENST00000368393 IGF1RP08069 1367 aa22.42■■□□□ 1.18
MUC1-208ENST00000368393 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
MUC1-208ENST00000368393 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.17
MUC1-208ENST00000368393 RUSC2Q8N2Y8 1516 aa22.39■■□□□ 1.17
MUC1-208ENST00000368393 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
MUC1-208ENST00000368393 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
MUC1-208ENST00000368393 SYNJ2O15056 1496 aa22.35■■□□□ 1.17
MUC1-208ENST00000368393 OSCARQ8IYS5 282 aa22.32■■□□□ 1.16
MUC1-208ENST00000368393 ADAMTS12P58397 1594 aa22.31■■□□□ 1.16
MUC1-208ENST00000368393 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
MUC1-208ENST00000368393 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
MUC1-208ENST00000368393 CHD1O14646 1710 aa22.25■■□□□ 1.15
MUC1-208ENST00000368393 GRIN2AQ12879 1464 aa22.23■■□□□ 1.15
MUC1-208ENST00000368393 FBLN2P98095 1184 aa22.23■■□□□ 1.15
MUC1-208ENST00000368393 NUP160Q12769 1436 aa22.21■■□□□ 1.15
MUC1-208ENST00000368393 CARMIL1Q5VZK9 1371 aa22.19■■□□□ 1.14
MUC1-208ENST00000368393 CLASP1Q7Z460 1538 aa22.18■■□□□ 1.14
MUC1-208ENST00000368393 CEP170Q5SW79 1584 aa22.14■■□□□ 1.13
MUC1-208ENST00000368393 PRXQ9BXM0 1461 aa22.14■■□□□ 1.13
MUC1-208ENST00000368393 CUL7Q14999 1698 aa22.13■■□□□ 1.13
MUC1-208ENST00000368393 CSRNP3Q8WYN3 585 aa22.08■■□□□ 1.13
MUC1-208ENST00000368393 EEA1Q15075 1411 aa22.07■■□□□ 1.12
MUC1-208ENST00000368393 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
MUC1-208ENST00000368393 ARHGEF11O15085 1522 aa21.99■■□□□ 1.11
MUC1-208ENST00000368393 KIAA0586Q9BVV6 1533 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms