RNA–Protein interactions for RNA: ENST00000573023.6

SLC12A4-212, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-212ENST00000573023 NISCHQ9Y2I1 1504 aa37.01■■■■□ 3.52
SLC12A4-212ENST00000573023 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
SLC12A4-212ENST00000573023 DCAF8L2P0C7V8 631 aa33.11■■■□□ 2.89
SLC12A4-212ENST00000573023 SUPT5HO00267 1087 aaKnown RBP32.82■■■□□ 2.84
SLC12A4-212ENST00000573023 ZCCHC6Q5VYS8 1495 aaKnown RBP31.09■■■□□ 2.57
SLC12A4-212ENST00000573023 CHIC1Q5VXU3 224 aa31.04■■■□□ 2.56
SLC12A4-212ENST00000573023 PCGF6Q9BYE7 350 aa30.81■■■□□ 2.52
SLC12A4-212ENST00000573023 EHMT2Q96KQ7 1210 aa30.77■■■□□ 2.52
SLC12A4-212ENST00000573023 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
SLC12A4-212ENST00000573023 LOC105371045A0A1W2PR82 267 aa30.59■■■□□ 2.49
SLC12A4-212ENST00000573023 FAM9AQ8IZU1 332 aaPredicted RBP30.57■■■□□ 2.48
SLC12A4-212ENST00000573023 TRIM41Q8WV44 630 aa30.31■■■□□ 2.44
SLC12A4-212ENST00000573023 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
SLC12A4-212ENST00000573023 HRCP23327 699 aa30.16■■■□□ 2.42
SLC12A4-212ENST00000573023 ABCC9O60706 1549 aa30.06■■■□□ 2.4
SLC12A4-212ENST00000573023 PPARGC1BQ86YN6 1023 aaKnown RBP29.94■■■□□ 2.38
SLC12A4-212ENST00000573023 SCRIBQ14160 1630 aa29.85■■■□□ 2.37
SLC12A4-212ENST00000573023 DCAF1Q9Y4B6 1507 aa29.76■■■□□ 2.35
SLC12A4-212ENST00000573023 TRIM26Q12899 539 aaPredicted RBP29.76■■■□□ 2.35
SLC12A4-212ENST00000573023 TTBK1Q5TCY1 1321 aaPredicted RBP29.68■■■□□ 2.34
SLC12A4-212ENST00000573023 RSF1Q96T23 1441 aaPredicted RBP29.57■■■□□ 2.32
SLC12A4-212ENST00000573023 PABPN1Q86U42 306 aaKnown RBP eCLIP29.3■■■□□ 2.282e-6■■□□□ 13.3
SLC12A4-212ENST00000573023 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
SLC12A4-212ENST00000573023 UBTFP17480 764 aaKnown RBP29.2■■■□□ 2.26
SLC12A4-212ENST00000573023 ZEB1P37275 1124 aaPredicted RBP29.2■■■□□ 2.26
SLC12A4-212ENST00000573023 RANGAP1P46060 587 aaPredicted RBP29.15■■■□□ 2.26
SLC12A4-212ENST00000573023 CCER1Q8TC90 406 aaPredicted RBP29.12■■■□□ 2.25
SLC12A4-212ENST00000573023 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
SLC12A4-212ENST00000573023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.96■■■□□ 2.23
SLC12A4-212ENST00000573023 NACADO15069 1562 aa28.96■■■□□ 2.23
SLC12A4-212ENST00000573023 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
SLC12A4-212ENST00000573023 APLP2Q06481 763 aa28.79■■■□□ 2.2
SLC12A4-212ENST00000573023 WIZO95785 1651 aa28.63■■■□□ 2.17
SLC12A4-212ENST00000573023 CSRNP3Q8WYN3 585 aa28.61■■■□□ 2.17
SLC12A4-212ENST00000573023 HNRNPUL2Q1KMD3 747 aaKnown RBP28.54■■■□□ 2.16
SLC12A4-212ENST00000573023 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
SLC12A4-212ENST00000573023 ABCC8Q09428 1581 aa28.36■■■□□ 2.13
SLC12A4-212ENST00000573023 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
SLC12A4-212ENST00000573023 SOGA1O94964 1423 aa28.31■■■□□ 2.12
SLC12A4-212ENST00000573023 DIEXFQ68CQ4 756 aaKnown RBP28.22■■■□□ 2.11
SLC12A4-212ENST00000573023 CEP162Q5TB80 1403 aa28.22■■■□□ 2.11
SLC12A4-212ENST00000573023 YTHDC1Q96MU7 727 aaKnown RBP28.19■■■□□ 2.1
SLC12A4-212ENST00000573023 ATP1B4Q9UN42 357 aaPredicted RBP28.12■■■□□ 2.09
SLC12A4-212ENST00000573023 CENPBP07199 599 aaPredicted RBP28.11■■■□□ 2.09
SLC12A4-212ENST00000573023 ITGAEP38570 1179 aa28.1■■■□□ 2.09
SLC12A4-212ENST00000573023 WRNQ14191 1432 aaPredicted RBP eCLIP28.09■■■□□ 2.09
SLC12A4-212ENST00000573023 TOP2AP11388 1531 aaKnown RBP28.08■■■□□ 2.09
SLC12A4-212ENST00000573023 TNIKQ9UKE5 1360 aa28.03■■■□□ 2.08
SLC12A4-212ENST00000573023 SMARCA4P51532 1647 aa28.03■■■□□ 2.08
SLC12A4-212ENST00000573023 RUSC2Q8N2Y8 1516 aa28.02■■■□□ 2.08
SLC12A4-212ENST00000573023 EEA1Q15075 1411 aa27.91■■■□□ 2.06
SLC12A4-212ENST00000573023 GOLGA3Q08378 1498 aa27.9■■■□□ 2.06
SLC12A4-212ENST00000573023 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.06
SLC12A4-212ENST00000573023 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
SLC12A4-212ENST00000573023 CLIP1P30622 1438 aa27.87■■■□□ 2.05
SLC12A4-212ENST00000573023 ZNF316A6NFI3 1004 aaPredicted RBP27.83■■■□□ 2.05
SLC12A4-212ENST00000573023 SCAF1Q9H7N4 1312 aaKnown RBP27.82■■■□□ 2.04
SLC12A4-212ENST00000573023 NEUROD1Q13562 356 aa27.72■■■□□ 2.03
SLC12A4-212ENST00000573023 ACIN1Q9UKV3 1341 aaKnown RBP27.72■■■□□ 2.03
SLC12A4-212ENST00000573023 GTF3C3Q9Y5Q9 886 aa27.71■■■□□ 2.03
SLC12A4-212ENST00000573023 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.03
SLC12A4-212ENST00000573023 ATAD2BQ9ULI0 1458 aa27.66■■■□□ 2.02
SLC12A4-212ENST00000573023 P3H3Q8IVL6 736 aa27.66■■■□□ 2.02
SLC12A4-212ENST00000573023 FAM50AQ14320 339 aaKnown RBP27.53■■■□□ 2
SLC12A4-212ENST00000573023 RAPGEF2Q9Y4G8 1499 aa27.5■■□□□ 1.99
SLC12A4-212ENST00000573023 MIER1Q8N108 512 aa27.46■■□□□ 1.99
SLC12A4-212ENST00000573023 PELP1Q8IZL8 1130 aaKnown RBP27.46■■□□□ 1.99
SLC12A4-212ENST00000573023 VPS8Q8N3P4 1428 aa27.43■■□□□ 1.98
SLC12A4-212ENST00000573023 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
SLC12A4-212ENST00000573023 KANK4Q5T7N3 995 aaPredicted RBP27.42■■□□□ 1.98
SLC12A4-212ENST00000573023 EIF4G1Q04637 1599 aaKnown RBP27.38■■□□□ 1.97
SLC12A4-212ENST00000573023 UNC13AQ9UPW8 1703 aa27.37■■□□□ 1.97
SLC12A4-212ENST00000573023 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
SLC12A4-212ENST00000573023 KIF27Q86VH2 1401 aa27.33■■□□□ 1.97
SLC12A4-212ENST00000573023 CUX2O14529 1486 aa27.13■■□□□ 1.93
SLC12A4-212ENST00000573023 ARID3CA6NKF2 412 aa27.08■■□□□ 1.93
SLC12A4-212ENST00000573023 KIF21BO75037 1637 aa27.04■■□□□ 1.92
SLC12A4-212ENST00000573023 CARMIL1Q5VZK9 1371 aa27.04■■□□□ 1.92
SLC12A4-212ENST00000573023 CCNB3Q8WWL7 1395 aa27■■□□□ 1.91
SLC12A4-212ENST00000573023 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
SLC12A4-212ENST00000573023 HIRIP3Q9BW71 556 aaPredicted RBP26.99■■□□□ 1.91
SLC12A4-212ENST00000573023 NCAPD3P42695 1498 aa26.98■■□□□ 1.91
SLC12A4-212ENST00000573023 SIN3AQ96ST3 1273 aa26.93■■□□□ 1.9
SLC12A4-212ENST00000573023 DDX10Q13206 875 aaKnown RBP26.92■■□□□ 1.9
SLC12A4-212ENST00000573023 CADPSQ9ULU8 1353 aa26.92■■□□□ 1.9
SLC12A4-212ENST00000573023 ARAP1Q96P48 1450 aa26.88■■□□□ 1.89
SLC12A4-212ENST00000573023 DHX57Q6P158 1386 aaKnown RBP26.88■■□□□ 1.89
SLC12A4-212ENST00000573023 TOP2BQ02880 1626 aa26.88■■□□□ 1.89
SLC12A4-212ENST00000573023 TRIM52Q96A61 297 aa26.86■■□□□ 1.89
SLC12A4-212ENST00000573023 PRXQ9BXM0 1461 aa26.86■■□□□ 1.89
SLC12A4-212ENST00000573023 IGF1RP08069 1367 aa26.86■■□□□ 1.89
SLC12A4-212ENST00000573023 CLSPNQ9HAW4 1339 aa26.84■■□□□ 1.89
SLC12A4-212ENST00000573023 CUX1P39880 1505 aa26.84■■□□□ 1.89
SLC12A4-212ENST00000573023 CHIC2Q9UKJ5 165 aa26.79■■□□□ 1.88
SLC12A4-212ENST00000573023 CFTRP13569 1480 aa26.79■■□□□ 1.88
SLC12A4-212ENST00000573023 BCANQ96GW7 911 aa26.79■■□□□ 1.88
SLC12A4-212ENST00000573023 RAB3GAP2Q9H2M9 1393 aa26.76■■□□□ 1.87
SLC12A4-212ENST00000573023 MTUS2Q5JR59 1369 aa26.76■■□□□ 1.87
SLC12A4-212ENST00000573023 CNGB1Q14028 1251 aaPredicted RBP26.75■■□□□ 1.87
SLC12A4-212ENST00000573023 NEFLP07196 543 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms