RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 NISCHQ9Y2I1 1504 aa52.1■■■■■ 5.93
UBE2D3-229ENST00000510129 CCDC180Q9P1Z9 1646 aa46.52■■■■■ 5.04
UBE2D3-229ENST00000510129 ABCC9O60706 1549 aa45.59■■■■■ 4.89
UBE2D3-229ENST00000510129 RB1CC1Q8TDY2 1594 aa43.9■■■■■ 4.62
UBE2D3-229ENST00000510129 NACADO15069 1562 aa43.8■■■■■ 4.6
UBE2D3-229ENST00000510129 DCAF8L2P0C7V8 631 aa43.57■■■■■ 4.57
UBE2D3-229ENST00000510129 MYO15BQ96JP2 1530 aa43.51■■■■■ 4.56
UBE2D3-229ENST00000510129 ZCCHC6Q5VYS8 1495 aaKnown RBP43.35■■■■■ 4.53
UBE2D3-229ENST00000510129 DCAF1Q9Y4B6 1507 aa43.2■■■■■ 4.51
UBE2D3-229ENST00000510129 UNC13AQ9UPW8 1703 aa42.76■■■■■ 4.44
UBE2D3-229ENST00000510129 PABPN1Q86U42 306 aaKnown RBP eCLIP42.51■■■■■ 4.4
UBE2D3-229ENST00000510129 BICRAQ9NZM4 1560 aa42.44■■■■■ 4.39
UBE2D3-229ENST00000510129 SCRIBQ14160 1630 aa42.28■■■■■ 4.36
UBE2D3-229ENST00000510129 SHROOM4Q9ULL8 1493 aa42.22■■■■■ 4.35
UBE2D3-229ENST00000510129 DNAJC5BQ9UF47 199 aa41.95■■■■■ 4.31
UBE2D3-229ENST00000510129 EIF4G1Q04637 1599 aaKnown RBP41.4■■■■■ 4.22
UBE2D3-229ENST00000510129 CC2D2AQ9P2K1 1620 aa41.27■■■■■ 4.2
UBE2D3-229ENST00000510129 CECR2Q9BXF3 1484 aa41.06■■■■■ 4.16
UBE2D3-229ENST00000510129 SMARCA4P51532 1647 aa40.48■■■■■ 4.07
UBE2D3-229ENST00000510129 BAZ1AQ9NRL2 1556 aaPredicted RBP40.47■■■■■ 4.07
UBE2D3-229ENST00000510129 NCAPD3P42695 1498 aa40.39■■■■■ 4.06
UBE2D3-229ENST00000510129 SMARCA2P51531 1590 aa40.35■■■■■ 4.05
UBE2D3-229ENST00000510129 ATAD2BQ9ULI0 1458 aa40.32■■■■■ 4.04
UBE2D3-229ENST00000510129 HMGXB3Q12766 1538 aa40.18■■■■■ 4.02
UBE2D3-229ENST00000510129 PEG3Q9GZU2 1588 aa40.14■■■■■ 4.02
UBE2D3-229ENST00000510129 MROH2BQ7Z745 1585 aa40.08■■■■■ 4.01
UBE2D3-229ENST00000510129 BAZ1BQ9UIG0 1483 aaKnown RBP40.01■■■■■ 4
UBE2D3-229ENST00000510129 WIZO95785 1651 aa39.63■■■■□ 3.93
UBE2D3-229ENST00000510129 RSF1Q96T23 1441 aaPredicted RBP39.57■■■■□ 3.92
UBE2D3-229ENST00000510129 ERCC6Q03468 1493 aa39.42■■■■□ 3.9
UBE2D3-229ENST00000510129 LAMC3Q9Y6N6 1575 aa39.38■■■■□ 3.9
UBE2D3-229ENST00000510129 NESP48681 1621 aa39.33■■■■□ 3.89
UBE2D3-229ENST00000510129 TOP2AP11388 1531 aaKnown RBP39.29■■■■□ 3.88
UBE2D3-229ENST00000510129 CADPSQ9ULU8 1353 aa39.18■■■■□ 3.86
UBE2D3-229ENST00000510129 PDS5BQ9NTI5 1447 aa39.14■■■■□ 3.86
UBE2D3-229ENST00000510129 CUX2O14529 1486 aa39.13■■■■□ 3.85
UBE2D3-229ENST00000510129 KIF21AQ7Z4S6 1674 aa38.92■■■■□ 3.82
UBE2D3-229ENST00000510129 CFTRP13569 1480 aa38.89■■■■□ 3.82
UBE2D3-229ENST00000510129 THOC2Q8NI27 1593 aaKnown RBP38.87■■■■□ 3.81
UBE2D3-229ENST00000510129 CCDC88BA6NC98 1476 aa38.77■■■■□ 3.8
UBE2D3-229ENST00000510129 CEP164Q9UPV0 1460 aa38.72■■■■□ 3.79
UBE2D3-229ENST00000510129 FANCD2Q9BXW9 1451 aa38.71■■■■□ 3.79
UBE2D3-229ENST00000510129 MRC2Q9UBG0 1479 aa38.7■■■■□ 3.79
UBE2D3-229ENST00000510129 PRDM2Q13029 1718 aa38.6■■■■□ 3.77
UBE2D3-229ENST00000510129 WDR62O43379 1518 aa38.58■■■■□ 3.77
UBE2D3-229ENST00000510129 SUPT5HO00267 1087 aaKnown RBP38.32■■■■□ 3.72
UBE2D3-229ENST00000510129 URB2Q14146 1524 aaKnown RBP38.28■■■■□ 3.72
UBE2D3-229ENST00000510129 ABCC8Q09428 1581 aa38.19■■■■□ 3.7
UBE2D3-229ENST00000510129 DNAJC5Q9H3Z4 198 aa38.15■■■■□ 3.7
UBE2D3-229ENST00000510129 TOPBP1Q92547 1522 aa38.05■■■■□ 3.68
UBE2D3-229ENST00000510129 DNMBPQ6XZF7 1577 aa38.02■■■■□ 3.68
UBE2D3-229ENST00000510129 IFT140Q96RY7 1462 aa37.93■■■■□ 3.66
UBE2D3-229ENST00000510129 POLA1P09884 1462 aaPredicted RBP37.7■■■■□ 3.63
UBE2D3-229ENST00000510129 ZNF608Q9ULD9 1512 aaPredicted RBP37.65■■■■□ 3.62
UBE2D3-229ENST00000510129 TARBP1Q13395 1621 aaKnown RBP37.64■■■■□ 3.62
UBE2D3-229ENST00000510129 CUX1P39880 1505 aa37.63■■■■□ 3.61
UBE2D3-229ENST00000510129 FGD5Q6ZNL6 1462 aa37.58■■■■□ 3.61
UBE2D3-229ENST00000510129 SOGA1O94964 1423 aa37.57■■■■□ 3.6
UBE2D3-229ENST00000510129 EIF4G3O43432 1585 aaKnown RBP37.55■■■■□ 3.6
UBE2D3-229ENST00000510129 WDR97A6NE52 1622 aa37.5■■■■□ 3.59
UBE2D3-229ENST00000510129 RAD54L2Q9Y4B4 1467 aa37.47■■■■□ 3.59
UBE2D3-229ENST00000510129 OSCARQ8IYS5 282 aa37.45■■■■□ 3.59
UBE2D3-229ENST00000510129 AQRO60306 1485 aaKnown RBP eCLIP37.42■■■■□ 3.582e-7■■■■□ 25.1
UBE2D3-229ENST00000510129 WRNQ14191 1432 aaPredicted RBP eCLIP37.36■■■■□ 3.57
UBE2D3-229ENST00000510129 TDRD9Q8NDG6 1382 aaKnown RBP37.32■■■■□ 3.57
UBE2D3-229ENST00000510129 TOP2BQ02880 1626 aa37.31■■■■□ 3.56
UBE2D3-229ENST00000510129 BIVM-ERCC5R4GMW8 1640 aa37.31■■■■□ 3.56
UBE2D3-229ENST00000510129 ABCA10Q8WWZ4 1543 aa37.25■■■■□ 3.55
UBE2D3-229ENST00000510129 SYNJ1O43426 1573 aa37.21■■■■□ 3.55
UBE2D3-229ENST00000510129 GRIN2BQ13224 1484 aa37.19■■■■□ 3.54
UBE2D3-229ENST00000510129 MAGI1Q96QZ7 1491 aaPredicted RBP37.15■■■■□ 3.54
UBE2D3-229ENST00000510129 GAPVD1Q14C86 1478 aa37.13■■■■□ 3.54
UBE2D3-229ENST00000510129 CHD1O14646 1710 aa37.11■■■■□ 3.53
UBE2D3-229ENST00000510129 SNAPC4Q5SXM2 1469 aa37.11■■■■□ 3.53
UBE2D3-229ENST00000510129 ABCA5Q8WWZ7 1642 aa37.09■■■■□ 3.53
UBE2D3-229ENST00000510129 FBLN2P98095 1184 aa37.06■■■■□ 3.52
UBE2D3-229ENST00000510129 PBRM1Q86U86 1689 aa37.05■■■■□ 3.52
UBE2D3-229ENST00000510129 CHMP7Q8WUX9 453 aaPredicted RBP36.98■■■■□ 3.51
UBE2D3-229ENST00000510129 SYNJ2O15056 1496 aa36.98■■■■□ 3.51
UBE2D3-229ENST00000510129 ERICH3Q5RHP9 1530 aa36.83■■■■□ 3.49
UBE2D3-229ENST00000510129 RIMBP3CA6NJZ7 1639 aa36.79■■■■□ 3.48
UBE2D3-229ENST00000510129 RIMBP3BA6NNM3 1639 aa36.79■■■■□ 3.48
UBE2D3-229ENST00000510129 RIMBP3Q9UFD9 1639 aa36.79■■■■□ 3.48
UBE2D3-229ENST00000510129 ARHGEF11O15085 1522 aa36.78■■■■□ 3.48
UBE2D3-229ENST00000510129 ADAMTS12P58397 1594 aa36.75■■■■□ 3.47
UBE2D3-229ENST00000510129 FHAD1B1AJZ9 1412 aa36.73■■■■□ 3.47
UBE2D3-229ENST00000510129 CLASP1Q7Z460 1538 aa36.73■■■■□ 3.47
UBE2D3-229ENST00000510129 TRIM41Q8WV44 630 aa36.71■■■■□ 3.47
UBE2D3-229ENST00000510129 GRIN2AQ12879 1464 aa36.69■■■■□ 3.46
UBE2D3-229ENST00000510129 KIF27Q86VH2 1401 aa36.65■■■■□ 3.46
UBE2D3-229ENST00000510129 NUP160Q12769 1436 aa36.54■■■■□ 3.44
UBE2D3-229ENST00000510129 CUL7Q14999 1698 aa36.46■■■■□ 3.43
UBE2D3-229ENST00000510129 CEP170Q5SW79 1584 aa36.45■■■■□ 3.43
UBE2D3-229ENST00000510129 IGF1RP08069 1367 aa36.45■■■■□ 3.43
UBE2D3-229ENST00000510129 CYB5RLQ6IPT4 315 aa36.43■■■■□ 3.42
UBE2D3-229ENST00000510129 ARAP1Q96P48 1450 aa36.43■■■■□ 3.42
UBE2D3-229ENST00000510129 SHROOM2Q13796 1616 aa36.29■■■■□ 3.4
UBE2D3-229ENST00000510129 CARMIL1Q5VZK9 1371 aa36.27■■■■□ 3.4
UBE2D3-229ENST00000510129 RUSC2Q8N2Y8 1516 aa36.21■■■■□ 3.39
UBE2D3-229ENST00000510129 KIAA0586Q9BVV6 1533 aa36.16■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms