RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-216ENST00000467134 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
MUC1-216ENST00000467134 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
MUC1-216ENST00000467134 ZCCHC6Q5VYS8 1495 aaKnown RBP21.4■■□□□ 1.02
MUC1-216ENST00000467134 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
MUC1-216ENST00000467134 MYO15BQ96JP2 1530 aa21.07■□□□□ 0.96
MUC1-216ENST00000467134 ABCC9O60706 1549 aa20.96■□□□□ 0.95
MUC1-216ENST00000467134 NACADO15069 1562 aa20.86■□□□□ 0.93
MUC1-216ENST00000467134 RB1CC1Q8TDY2 1594 aa20.68■□□□□ 0.9
MUC1-216ENST00000467134 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
MUC1-216ENST00000467134 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
MUC1-216ENST00000467134 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
MUC1-216ENST00000467134 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
MUC1-216ENST00000467134 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
MUC1-216ENST00000467134 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
MUC1-216ENST00000467134 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
MUC1-216ENST00000467134 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
MUC1-216ENST00000467134 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
MUC1-216ENST00000467134 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.73
MUC1-216ENST00000467134 MROH2BQ7Z745 1585 aa19.58■□□□□ 0.73
MUC1-216ENST00000467134 PEG3Q9GZU2 1588 aa19.5■□□□□ 0.71
MUC1-216ENST00000467134 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
MUC1-216ENST00000467134 WIZO95785 1651 aa19.42■□□□□ 0.7
MUC1-216ENST00000467134 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.69
MUC1-216ENST00000467134 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
MUC1-216ENST00000467134 TOP2AP11388 1531 aaKnown RBP19.33■□□□□ 0.68
MUC1-216ENST00000467134 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.67
MUC1-216ENST00000467134 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
MUC1-216ENST00000467134 NCAPD3P42695 1498 aa19.18■□□□□ 0.66
MUC1-216ENST00000467134 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
MUC1-216ENST00000467134 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
MUC1-216ENST00000467134 CCDC88BA6NC98 1476 aa19.01■□□□□ 0.63
MUC1-216ENST00000467134 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
MUC1-216ENST00000467134 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
MUC1-216ENST00000467134 CFTRP13569 1480 aa18.71■□□□□ 0.59
MUC1-216ENST00000467134 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
MUC1-216ENST00000467134 CADPSQ9ULU8 1353 aa18.6■□□□□ 0.57
MUC1-216ENST00000467134 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
MUC1-216ENST00000467134 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
MUC1-216ENST00000467134 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
MUC1-216ENST00000467134 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
MUC1-216ENST00000467134 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
MUC1-216ENST00000467134 TRIM41Q8WV44 630 aa18.45■□□□□ 0.54
MUC1-216ENST00000467134 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
MUC1-216ENST00000467134 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.54
MUC1-216ENST00000467134 PDS5BQ9NTI5 1447 aa18.37■□□□□ 0.53
MUC1-216ENST00000467134 NESP48681 1621 aa18.37■□□□□ 0.53
MUC1-216ENST00000467134 CUX1P39880 1505 aa18.35■□□□□ 0.53
MUC1-216ENST00000467134 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
MUC1-216ENST00000467134 DNMBPQ6XZF7 1577 aa18.31■□□□□ 0.52
MUC1-216ENST00000467134 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
MUC1-216ENST00000467134 EEA1Q15075 1411 aa18.3■□□□□ 0.52
MUC1-216ENST00000467134 TOPBP1Q92547 1522 aa18.21■□□□□ 0.51
MUC1-216ENST00000467134 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
MUC1-216ENST00000467134 FGD5Q6ZNL6 1462 aa18.15■□□□□ 0.5
MUC1-216ENST00000467134 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
MUC1-216ENST00000467134 WDR62O43379 1518 aa18.12■□□□□ 0.49
MUC1-216ENST00000467134 WDR97A6NE52 1622 aa18.11■□□□□ 0.49
MUC1-216ENST00000467134 SOGA1O94964 1423 aa18.1■□□□□ 0.49
MUC1-216ENST00000467134 POLA1P09884 1462 aaPredicted RBP18.09■□□□□ 0.49
MUC1-216ENST00000467134 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.49
MUC1-216ENST00000467134 KIF21BO75037 1637 aa18.07■□□□□ 0.48
MUC1-216ENST00000467134 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
MUC1-216ENST00000467134 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
MUC1-216ENST00000467134 ERCC6Q03468 1493 aa18.03■□□□□ 0.48
MUC1-216ENST00000467134 RUSC2Q8N2Y8 1516 aa18.02■□□□□ 0.47
MUC1-216ENST00000467134 TARBP1Q13395 1621 aaKnown RBP18.01■□□□□ 0.47
MUC1-216ENST00000467134 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
MUC1-216ENST00000467134 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
MUC1-216ENST00000467134 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
MUC1-216ENST00000467134 CUX2O14529 1486 aa17.97■□□□□ 0.47
MUC1-216ENST00000467134 GOLGA3Q08378 1498 aa17.94■□□□□ 0.46
MUC1-216ENST00000467134 IFT140Q96RY7 1462 aa17.93■□□□□ 0.46
MUC1-216ENST00000467134 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
MUC1-216ENST00000467134 FAM9AQ8IZU1 332 aaPredicted RBP17.92■□□□□ 0.46
MUC1-216ENST00000467134 RAD54L2Q9Y4B4 1467 aa17.92■□□□□ 0.46
MUC1-216ENST00000467134 CUL7Q14999 1698 aa17.92■□□□□ 0.46
MUC1-216ENST00000467134 PBRM1Q86U86 1689 aa17.84■□□□□ 0.45
MUC1-216ENST00000467134 IGF1RP08069 1367 aa17.84■□□□□ 0.45
MUC1-216ENST00000467134 TNIKQ9UKE5 1360 aa17.84■□□□□ 0.45
MUC1-216ENST00000467134 LOC105371045A0A1W2PR82 267 aa17.84■□□□□ 0.45
MUC1-216ENST00000467134 GAPVD1Q14C86 1478 aa17.83■□□□□ 0.45
MUC1-216ENST00000467134 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
MUC1-216ENST00000467134 EIF4G3O43432 1585 aaKnown RBP17.77■□□□□ 0.44
MUC1-216ENST00000467134 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
MUC1-216ENST00000467134 CARMIL1Q5VZK9 1371 aa17.75■□□□□ 0.43
MUC1-216ENST00000467134 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
MUC1-216ENST00000467134 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
MUC1-216ENST00000467134 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
MUC1-216ENST00000467134 CTTNBP2Q8WZ74 1663 aa17.69■□□□□ 0.42
MUC1-216ENST00000467134 FHAD1B1AJZ9 1412 aa17.68■□□□□ 0.42
MUC1-216ENST00000467134 CEP162Q5TB80 1403 aa17.68■□□□□ 0.42
MUC1-216ENST00000467134 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
MUC1-216ENST00000467134 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
MUC1-216ENST00000467134 UBTFP17480 764 aaKnown RBP17.64■□□□□ 0.41
MUC1-216ENST00000467134 SNAPC4Q5SXM2 1469 aa17.58■□□□□ 0.41
MUC1-216ENST00000467134 CLIP1P30622 1438 aa17.58■□□□□ 0.41
MUC1-216ENST00000467134 EFCAB5A4FU69 1503 aa17.55■□□□□ 0.4
MUC1-216ENST00000467134 SYNJ2O15056 1496 aa17.55■□□□□ 0.4
MUC1-216ENST00000467134 GRIN2AQ12879 1464 aa17.52■□□□□ 0.4
MUC1-216ENST00000467134 EHMT2Q96KQ7 1210 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms