RNA–Protein interactions for RNA: ENST00000614519.4

MUC1-226, Transcript of mucin 1, cell surface associated, humanhuman

TSL 2 BASIC

Gene MUC1, Length 1,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-226ENST00000614519 NISCHQ9Y2I1 1504 aa35.04■■■■□ 3.2
MUC1-226ENST00000614519 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
MUC1-226ENST00000614519 ABCC9O60706 1549 aa30.06■■■□□ 2.4
MUC1-226ENST00000614519 ZCCHC6Q5VYS8 1495 aaKnown RBP29.27■■■□□ 2.28
MUC1-226ENST00000614519 NACADO15069 1562 aa29.11■■■□□ 2.25
MUC1-226ENST00000614519 RB1CC1Q8TDY2 1594 aa29.09■■■□□ 2.25
MUC1-226ENST00000614519 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
MUC1-226ENST00000614519 DCAF1Q9Y4B6 1507 aa29.01■■■□□ 2.23
MUC1-226ENST00000614519 MYO15BQ96JP2 1530 aa29■■■□□ 2.23
MUC1-226ENST00000614519 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
MUC1-226ENST00000614519 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
MUC1-226ENST00000614519 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
MUC1-226ENST00000614519 PABPN1Q86U42 306 aaKnown RBP eCLIP28.06■■■□□ 2.08
MUC1-226ENST00000614519 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
MUC1-226ENST00000614519 EIF4G1Q04637 1599 aaKnown RBP27.43■■□□□ 1.98
MUC1-226ENST00000614519 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
MUC1-226ENST00000614519 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
MUC1-226ENST00000614519 DNAJC5BQ9UF47 199 aa27.24■■□□□ 1.95
MUC1-226ENST00000614519 SMARCA4P51532 1647 aa27.18■■□□□ 1.94
MUC1-226ENST00000614519 BAZ1AQ9NRL2 1556 aaPredicted RBP27.16■■□□□ 1.94
MUC1-226ENST00000614519 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
MUC1-226ENST00000614519 SMARCA2P51531 1590 aa26.89■■□□□ 1.9
MUC1-226ENST00000614519 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
MUC1-226ENST00000614519 ATAD2BQ9ULI0 1458 aa26.88■■□□□ 1.89
MUC1-226ENST00000614519 WIZO95785 1651 aa26.81■■□□□ 1.88
MUC1-226ENST00000614519 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
MUC1-226ENST00000614519 HMGXB3Q12766 1538 aa26.77■■□□□ 1.88
MUC1-226ENST00000614519 RSF1Q96T23 1441 aaPredicted RBP26.76■■□□□ 1.87
MUC1-226ENST00000614519 BAZ1BQ9UIG0 1483 aaKnown RBP26.69■■□□□ 1.86
MUC1-226ENST00000614519 TOP2AP11388 1531 aaKnown RBP26.5■■□□□ 1.83
MUC1-226ENST00000614519 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
MUC1-226ENST00000614519 CCDC88BA6NC98 1476 aa26.14■■□□□ 1.78
MUC1-226ENST00000614519 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
MUC1-226ENST00000614519 NESP48681 1621 aa26.11■■□□□ 1.77
MUC1-226ENST00000614519 PRDM2Q13029 1718 aa26.01■■□□□ 1.75
MUC1-226ENST00000614519 CADPSQ9ULU8 1353 aa26.01■■□□□ 1.75
MUC1-226ENST00000614519 CFTRP13569 1480 aa25.96■■□□□ 1.75
MUC1-226ENST00000614519 KIF21AQ7Z4S6 1674 aa25.93■■□□□ 1.74
MUC1-226ENST00000614519 ERCC6Q03468 1493 aa25.87■■□□□ 1.73
MUC1-226ENST00000614519 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
MUC1-226ENST00000614519 FANCD2Q9BXW9 1451 aa25.77■■□□□ 1.72
MUC1-226ENST00000614519 THOC2Q8NI27 1593 aaKnown RBP25.73■■□□□ 1.71
MUC1-226ENST00000614519 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
MUC1-226ENST00000614519 MRC2Q9UBG0 1479 aa25.61■■□□□ 1.69
MUC1-226ENST00000614519 WDR62O43379 1518 aa25.56■■□□□ 1.68
MUC1-226ENST00000614519 URB2Q14146 1524 aaKnown RBP25.52■■□□□ 1.68
MUC1-226ENST00000614519 CUX2O14529 1486 aa25.5■■□□□ 1.67
MUC1-226ENST00000614519 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
MUC1-226ENST00000614519 TOPBP1Q92547 1522 aa25.41■■□□□ 1.66
MUC1-226ENST00000614519 ABCC8Q09428 1581 aa25.39■■□□□ 1.66
MUC1-226ENST00000614519 CUX1P39880 1505 aa25.34■■□□□ 1.65
MUC1-226ENST00000614519 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
MUC1-226ENST00000614519 SYNJ1O43426 1573 aa25.25■■□□□ 1.63
MUC1-226ENST00000614519 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
MUC1-226ENST00000614519 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
MUC1-226ENST00000614519 POLA1P09884 1462 aaPredicted RBP25.2■■□□□ 1.62
MUC1-226ENST00000614519 FGD5Q6ZNL6 1462 aa25.2■■□□□ 1.62
MUC1-226ENST00000614519 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
MUC1-226ENST00000614519 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
MUC1-226ENST00000614519 WDR97A6NE52 1622 aa25.1■■□□□ 1.61
MUC1-226ENST00000614519 RAD54L2Q9Y4B4 1467 aa25.08■■□□□ 1.6
MUC1-226ENST00000614519 SOGA1O94964 1423 aa25.05■■□□□ 1.6
MUC1-226ENST00000614519 ZNF608Q9ULD9 1512 aaPredicted RBP25.02■■□□□ 1.6
MUC1-226ENST00000614519 EIF4G3O43432 1585 aaKnown RBP25.02■■□□□ 1.6
MUC1-226ENST00000614519 ABCA10Q8WWZ4 1543 aa24.95■■□□□ 1.58
MUC1-226ENST00000614519 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
MUC1-226ENST00000614519 PBRM1Q86U86 1689 aa24.89■■□□□ 1.58
MUC1-226ENST00000614519 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.57
MUC1-226ENST00000614519 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
MUC1-226ENST00000614519 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
MUC1-226ENST00000614519 TRIM41Q8WV44 630 aa24.78■■□□□ 1.56
MUC1-226ENST00000614519 GRIN2BQ13224 1484 aa24.76■■□□□ 1.55
MUC1-226ENST00000614519 SNAPC4Q5SXM2 1469 aa24.71■■□□□ 1.55
MUC1-226ENST00000614519 CHD1O14646 1710 aa24.7■■□□□ 1.54
MUC1-226ENST00000614519 ERICH3Q5RHP9 1530 aa24.68■■□□□ 1.54
MUC1-226ENST00000614519 MAGI1Q96QZ7 1491 aaPredicted RBP24.68■■□□□ 1.54
MUC1-226ENST00000614519 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
MUC1-226ENST00000614519 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
MUC1-226ENST00000614519 ADAMTS12P58397 1594 aa24.64■■□□□ 1.54
MUC1-226ENST00000614519 RUSC2Q8N2Y8 1516 aa24.58■■□□□ 1.53
MUC1-226ENST00000614519 CUL7Q14999 1698 aa24.57■■□□□ 1.52
MUC1-226ENST00000614519 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
MUC1-226ENST00000614519 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
MUC1-226ENST00000614519 IGF1RP08069 1367 aa24.5■■□□□ 1.51
MUC1-226ENST00000614519 FBLN2P98095 1184 aa24.48■■□□□ 1.51
MUC1-226ENST00000614519 GRIN2AQ12879 1464 aa24.46■■□□□ 1.51
MUC1-226ENST00000614519 CHMP7Q8WUX9 453 aaPredicted RBP24.45■■□□□ 1.5
MUC1-226ENST00000614519 OSCARQ8IYS5 282 aa24.41■■□□□ 1.5
MUC1-226ENST00000614519 EEA1Q15075 1411 aa24.4■■□□□ 1.5
MUC1-226ENST00000614519 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
MUC1-226ENST00000614519 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
MUC1-226ENST00000614519 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
MUC1-226ENST00000614519 NUP160Q12769 1436 aa24.32■■□□□ 1.48
MUC1-226ENST00000614519 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
MUC1-226ENST00000614519 PRXQ9BXM0 1461 aa24.29■■□□□ 1.48
MUC1-226ENST00000614519 DNAJC5Q9H3Z4 198 aa24.28■■□□□ 1.48
MUC1-226ENST00000614519 FAM9AQ8IZU1 332 aaPredicted RBP24.27■■□□□ 1.48
MUC1-226ENST00000614519 CSRNP3Q8WYN3 585 aa24.27■■□□□ 1.48
MUC1-226ENST00000614519 CTTNBP2Q8WZ74 1663 aa24.23■■□□□ 1.47
MUC1-226ENST00000614519 KIF21BO75037 1637 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms